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Rev: 53 - https://secure.bioinfweb.info/Code/svn/PhyDE2 /
Revision Information - 53
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Revision:53
Date: 11/15/18 5:38 PM
Author: SarahvanGroen
Message: Document renamed to PhyDE2AlignmentModel.
DocumentEdit renamed to AlignmentEdit.
DefaultPhyDE2AlignmentModel and SingleReadContigAlignmentModel added.
Action Path
Added /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/DefaultPhyDE2AlignmentModel.java
Deleted /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/Document.java
Added /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/PhyDE2AlignmentModel.java
(Copy from /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/Document.java @ 51)
Added /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/SingleReadContigAlignmentModel.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/io/PhyDEDocumentDataAdapter.java
Added /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/AlignmentEdit.java
(Copy from /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/DocumentEdit.java @ 51)
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/AlignmentModelEdit.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/AlignmentModelEditFactory.java
Deleted /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/DocumentEdit.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/edit/AbstractCharSetEdit.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/edit/AddCharSetEdit.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/edit/AddColumnsToCharSetEdit.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/edit/AddDeleteCharSetEdit.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/edit/AddRemoveCharSetColumns.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/edit/AddSequenceEdit.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/edit/ChangeCharSetColorEdit.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/edit/DeleteCharSetEdit.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/edit/RemoveColumnsFromCharSetEdit.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/edit/RenameCharSetEdit.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/document/undo/edit/ReverseComplementEdit.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/MainFrame.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/AbstractPhyDEAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/ActionManagement.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/AddCharSetAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/AddColumnsToCharSetAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/AddSequenceAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/ChangeCharSetColorAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/DeleteCharSetAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/DeleteSequenceAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/RedoAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/RemoveColumnsFromCharSetAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/RemoveGapsAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/RenameCharSetAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/RenameSequenceAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/ReverseComplementAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/UndoAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/edit/UndoRedoToAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/file/ExportAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/file/NewAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/file/OpenAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/file/SaveAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/file/SaveAsAction.java
Modified /branches/ExtendedDataModel/main/src/info/bioinfweb/phyde2/gui/actions/help/AboutAction.java


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