Package | Description |
---|---|
info.bioinfweb.jphyloio.events.meta |
Contains event classes that model metadata, as well as related implementations.
|
info.bioinfweb.jphyloio.formats.nexml |
Contains classes for reading from and writing to streams/files in NeXML format.
|
info.bioinfweb.jphyloio.formats.phyloxml.receivers |
Contains implementations for
JPhyloIOEventReceiver necessary for writing
PhyloXML. |
info.bioinfweb.jphyloio.formats.xml.elementreaders |
Contains general (abstract) implementations of
XMLElementReader used by
readers of XML formats. |
info.bioinfweb.jphyloio.formats.xtg |
Contains classes for reading from and writing to streams/files in XTG format.
|
info.bioinfweb.jphyloio.utils |
Contains general tool classes of JPhyloIO.
|
Modifier and Type | Method and Description |
---|---|
URIOrStringIdentifier |
LiteralMetadataEvent.getOriginalType() |
URIOrStringIdentifier |
LiteralMetadataEvent.getOriginalType() |
URIOrStringIdentifier |
LiteralMetadataEvent.getPredicate() |
URIOrStringIdentifier |
LiteralMetadataEvent.getPredicate() |
URIOrStringIdentifier |
ResourceMetadataEvent.getRel() |
URIOrStringIdentifier |
ResourceMetadataEvent.getRel() |
Modifier and Type | Method and Description |
---|---|
URIOrStringIdentifier |
NeXMLReaderStreamDataProvider.getAdditionalResourceMetaRel()
Returns a {link URIOrStringIdentifier} if an additional
ResourceMetadataEvent is to be created to enclose
meta data of elements without a JPhyloIOEvent representation or null if this the enclosing event
was already generated. |
URIOrStringIdentifier |
NeXMLReaderStreamDataProvider.getAdditionalResourceMetaRel()
Returns a {link URIOrStringIdentifier} if an additional
ResourceMetadataEvent is to be created to enclose
meta data of elements without a JPhyloIOEvent representation or null if this the enclosing event
was already generated. |
URIOrStringIdentifier |
NeXMLWriterStreamDataProvider.getCurrentLiteralMetaDatatype() |
URIOrStringIdentifier |
NeXMLWriterStreamDataProvider.getCurrentLiteralMetaDatatype() |
Modifier and Type | Method and Description |
---|---|
void |
NeXMLReaderStreamDataProvider.setAdditionalResourceMetaRel(URIOrStringIdentifier additionalResourceMetaRel) |
void |
NeXMLReaderStreamDataProvider.setAdditionalResourceMetaRel(URIOrStringIdentifier additionalResourceMetaRel) |
void |
NeXMLWriterStreamDataProvider.setCurrentLiteralMetaDatatype(URIOrStringIdentifier currentLiteralMetaDatatype) |
void |
NeXMLWriterStreamDataProvider.setCurrentLiteralMetaDatatype(URIOrStringIdentifier currentLiteralMetaDatatype) |
Modifier and Type | Method and Description |
---|---|
URIOrStringIdentifier |
PhyloXMLMetaDataReceiver.getOriginalType() |
URIOrStringIdentifier |
PhyloXMLMetaDataReceiver.getOriginalType() |
Modifier and Type | Method and Description |
---|---|
protected boolean |
PhyloXMLMetaDataReceiver.determineWriteMeta(String id,
URIOrStringIdentifier predicate) |
protected boolean |
PhyloXMLMetaDataReceiver.determineWriteMeta(String id,
URIOrStringIdentifier predicate) |
protected void |
PhyloXMLMetaDataReceiver.writePropertyTag(URIOrStringIdentifier predicate,
URIOrStringIdentifier datatype,
String value,
boolean writeEndElement) |
protected void |
PhyloXMLMetaDataReceiver.writePropertyTag(URIOrStringIdentifier predicate,
URIOrStringIdentifier datatype,
String value,
boolean writeEndElement) |
Constructor and Description |
---|
XMLStartElementReader(QName literalPredicate,
QName resourcePredicate,
URIOrStringIdentifier datatype,
boolean isEdgeMeta,
AttributeInfo... attributeInformation) |
XMLStartElementReader(QName literalPredicate,
QName resourcePredicate,
URIOrStringIdentifier datatype,
boolean isEdgeMeta,
AttributeInfo... attributeInformation) |
Constructor and Description |
---|
XTGFormattedTextElementReader(QName literalPredicate,
QName resourcePredicate,
URIOrStringIdentifier datatype,
QName textPredicate,
boolean isEdgeMeta,
AttributeInfo... attributeInformation) |
XTGFormattedTextElementReader(QName literalPredicate,
QName resourcePredicate,
URIOrStringIdentifier datatype,
QName textPredicate,
boolean isEdgeMeta,
AttributeInfo... attributeInformation) |
Modifier and Type | Method and Description |
---|---|
static void |
JPhyloIOWritingUtils.writeSimpleLiteralMetadata(JPhyloIOEventReceiver receiver,
String id,
String label,
URIOrStringIdentifier predicate,
URIOrStringIdentifier originalType,
Object objectValue,
String stringRepresentation)
Writes an event subsequence modeling a literal metadata annotation with a simple value.
|
static void |
JPhyloIOWritingUtils.writeSimpleLiteralMetadata(JPhyloIOEventReceiver receiver,
String id,
String label,
URIOrStringIdentifier predicate,
URIOrStringIdentifier originalType,
Object objectValue,
String stringRepresentation)
Writes an event subsequence modeling a literal metadata annotation with a simple value.
|
static void |
JPhyloIOWritingUtils.writeTerminalResourceMetadata(JPhyloIOEventReceiver receiver,
String id,
String label,
URIOrStringIdentifier rel,
URI hRef)
Writes a
ResourceMetadataEvent and its respective end event to the specified receiver. |
static void |
JPhyloIOWritingUtils.writeTerminalResourceMetadata(JPhyloIOEventReceiver receiver,
String id,
String label,
URIOrStringIdentifier rel,
URI hRef)
Writes a
ResourceMetadataEvent and its respective end event to the specified receiver. |
static void |
JPhyloIOWritingUtils.writeTerminalResourceMetadata(JPhyloIOEventReceiver receiver,
String id,
String label,
URIOrStringIdentifier rel,
URI hRef,
String about)
Writes a
ResourceMetadataEvent and its respective end event to the specified receiver. |
static void |
JPhyloIOWritingUtils.writeTerminalResourceMetadata(JPhyloIOEventReceiver receiver,
String id,
String label,
URIOrStringIdentifier rel,
URI hRef,
String about)
Writes a
ResourceMetadataEvent and its respective end event to the specified receiver. |