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		Date	Author	Revision	Message
		5/25/18 9:37 AM	BenStoever	1033	Legal information added to GitHub ReadMe.	[more]
		Action Path Modified /trunk/README.md
		4/18/18 5:48 PM	BenStoever	1032	Tag for release 0.9.0 created.	[more]
		Action Path Added /tags/Release_0.9.0 (Copy from /trunk @ 1031)
		3/8/18 12:12 PM	BenStoever	1031	RandomAccessIndexTranslatorTest extended.	[more]
		Action Path Modified /trunk/test/src/info/bioinfweb/libralign/model/utils/indextranslation/RandomAccessIndexTranslatorTest.java
		3/8/18 12:06 PM	BenStoever	1030	RandomAccessIndexTranslator now supports handling indices outside of the alignment.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/model/utils/indextranslation/RandomAccessIndexTranslator.java
		3/6/18 7:49 PM	BenStoever	1029	JavaDoc extended.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/alignmentarea/tokenpainter/AbstractTokenPainter.java Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/alignmentarea/tokenpainter/TokenPainter.java
		3/6/18 6:19 PM	BenStoever	1028	JavaDoc corrected.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/alignmentarea/selection/OneDimensionalSelection.java Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/alignmentarea/selection/SelectionModel.java
		3/6/18 5:21 PM	BenStoever	1027	ColorOverlay added and used by AlignmentArea and AbstractTokenPainter.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/alignmentarea/AlignmentArea.java Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/alignmentarea/tokenpainter/AbstractTokenPainter.java Added /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/alignmentarea/tokenpainter/ColorOverlay.java
		3/6/18 2:39 PM	BenStoever	1026	JavaDoc edited.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/multiplealignments/MultipleAlignmentsContainer.java
		2/26/18 3:29 PM	BenStoever	1025	Tag for release 0.8.0 created.	[more]
		Action Path Added /tags/Release_0.8.0 (Copy from /trunk @ 1024)
		2/26/18 3:22 PM	BenStoever	1024	Dependency JARs and pom.xml in core module updated.	[more]
		Action Path Deleted /trunk/main/info.bioinfweb.libralign.core/include/lib/bioinfweb-commons-java-core-3.0.0.jar Added /trunk/main/info.bioinfweb.libralign.core/include/lib/bioinfweb-commons-java-core-3.2.0.jar Deleted /trunk/main/info.bioinfweb.libralign.core/include/lib/bioinfweb-commons-java-swing-3.0.0.jar Added /trunk/main/info.bioinfweb.libralign.core/include/lib/bioinfweb-commons-java-swing-3.1.0.jar Modified /trunk/main/info.bioinfweb.libralign.core/pom.xml
		2/23/18 3:17 PM	BenStoever	1023	Properties LabelDataArea.isAlignToFirstColumn() and isAlignToScrollPosition() added.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/dataarea/implementations/LabelDataArea.java
		2/23/18 2:33 PM	BenStoever	1022	PaintSettings.zoomFont() added. Bug fix: LabelDataArea now uses the specified font and adjusts its size to the current zoom factor.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/alignmentarea/paintsettings/PaintSettings.java Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/dataarea/implementations/LabelDataArea.java
		2/23/18 10:50 AM	BenStoever	1021	Minor changes.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.swing/src/info/bioinfweb/libralign/alignmentarea/rowsarea/SwingAlignmentRowsArea.java
		2/22/18 3:36 PM	BenStoever	1020	Tag for release 0.7.0 created.	[more]
		Action Path Added /tags/Release_0.7.0 (Copy from /trunk @ 1019)
		2/21/18 6:32 PM	BenStoever	1019	Unused and unfinished SequenceIndexModel removed. Initial version of LabelDataArea added.	[more]
		Action Path Added /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/dataarea/implementations/LabelDataArea.java Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/dataarea/implementations/sequenceindex/SequenceIndexArea.java Deleted /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/dataarea/implementations/sequenceindex/SequenceIndexModel.java
		2/20/18 12:49 PM	BenStoever	1018	Typo correction.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/alignmentarea/content/SequenceArea.java
		2/19/18 7:30 PM	BenStoever	1017	AlignmentModelChangeAdapter added.	[more]
		Action Path Added /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/model/AlignmentModelChangeAdapter.java
		2/19/18 2:16 PM	BenStoever	1016	Bug fix in calculating unaligned length in RandomAccessIndexTranslator.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/model/utils/indextranslation/RandomAccessIndexTranslator.java
		2/19/18 2:15 PM	BenStoever	1015	Test cases for IndexTranslator.getUnalignedLength() added.	[more]
		Action Path Modified /trunk/test/src/info/bioinfweb/libralign/model/utils/indextranslation/RandomAccessIndexTranslatorTest.java
		2/19/18 2:06 PM	BenStoever	1014	IndexTranslator.getUnalignedLength() added and implemented in RandomAccessIndexTranslator.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/model/utils/indextranslation/IndexTranslator.java Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/model/utils/indextranslation/RandomAccessIndexTranslator.java
		2/16/18 11:10 AM	BenStoever	1013	Interface IndexTranslator extracted from AbstractIndexTranslator.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/model/utils/indextranslation/AbstractIndexTranslator.java Added /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/model/utils/indextranslation/IndexTranslator.java
		2/16/18 10:47 AM	BenStoever	1012	JavaDoc extended.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.core/src/info/bioinfweb/libralign/model/implementations/decorate/DelegatedAlignmentModelView.java
		2/13/18 12:19 PM	BenStoever	1011	Tag for release 0.6.0 created.	[more]
		Action Path Added /tags/Release_0.6.0 (Copy from /trunk @ 1010)
		2/13/18 11:55 AM	BenStoever	1010	pom.xml added to biojava3 module.	[more]
		Action Path Added /trunk/main/info.bioinfweb.libralign.biojava3/pom.xml
		2/13/18 11:55 AM	BenStoever	1009	pom.xml for biojava1 module updated.	[more]
		Action Path Modified /trunk/main/info.bioinfweb.libralign.biojava1/pom.xml
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