Download version 0.1.0 of AlignmentComparator
You are downloading an older version (0.1.0-193 alpha) of AlignmentComparator which was released on 2018-02-13 20:25:00.0 The latest version can be found here.
License
AlignmentComparator is distributed under GNU General Public License. Copyright (C) 2012-2018 by Ben Stöver. This program is distributed in the hope that it will be useful, but without any warranty; without even the implied warranty of merchantability or fitness for a particular purpose. See the GNU General Public License for more details.
By downloading AlignmentComparator you agree with the License. Please read it carefully.
Downloads
Complete download
The complete download contains the classes of all components associated with this release.
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Subversion
Developers can also check out the source codes directly from the subversion repository under https://secure.bioinfweb.info/Code/svn/AlignmentComparator/trunk/main/.
Changes in this version
- Maximum sequence pair match comparison algorithm added.
- Average index comparison algorithm added, which can also compare more than two alignments at the same time.
- GUI components are now based on LibrAlign.
- Each compared alignment now has its own scroll container.
- NeXML now used to store comparison results.
- I/O is now based on JPhyloIO which allows to read FASTA, Phylip, Nexus and NeXML.
- Functionality to add comments and manually edit the superalignment is currently not available.
