JPhyloIO event lister

Source: https://secure.bioinfweb.info/Code/svn/JPhyloIO/trunk/demo/info.bioinfweb.jphyloio.demo.eventwebview/data/examples/MEGA/MSALabels.meg

JPhyloIO version: 0.5.4-1672 alpha

Event stream

DOCUMENT.START (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

ALIGNMENT.START (info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "matrix0"
  • linkedID: null

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: "Title"
  • id: "meta1"
  • sequenceType: SIMPLE
  • originalType: null
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/Formats/MEGA/Predicates/}TITLE, Title)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: null
  • stringValue: "HSP 20 Aligned by MEGA 4"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: "codetable"
  • id: "meta4"
  • sequenceType: SIMPLE
  • originalType: null
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/Formats/MEGA/Predicates/}FORMAT.CODETABLE, codetable)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: null
  • stringValue: "Standard"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

TOKEN_SET_DEFINITION.START (info.bioinfweb.jphyloio.events.TokenSetDefinitionEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "tokenSet2"
  • setType: DNA

SINGLE_TOKEN_DEFINITION.START (info.bioinfweb.jphyloio.events.SingleTokenDefinitionEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "tokenDefinition3"
  • constituents: null
  • tokenType: null
  • meaning: GAP
  • tokenName: "-"

SINGLE_TOKEN_DEFINITION.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

TOKEN_SET_DEFINITION.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

SEQUENCE.START (info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "Rattus_norvegicus"
  • id: "seq0"
  • linkedID: null

SEQUENCE_TOKENS.SOLE (info.bioinfweb.jphyloio.events.SequenceTokensEvent) [JavaDoc] [Source code]

Properties:

  • tokens: ["G", "C", "A", "G", "G", "A", "T", "G", "G", "A", "G", "A", "T", "C", "C", "G", "G", "G", "T", "G", "C", "C", "T", "G", "T", "G", "C", "A", "G", "C", "C", "T", "T", "C", "T", "T", "G", "G", "C", "T", "G", "C", "G", "C", "C", "G", "T", "G", "C", "T", "T", "C", "A", "G", "C", "T", "C", "C", "T", "T"]

SEQUENCE_TOKENS.SOLE (info.bioinfweb.jphyloio.events.SequenceTokensEvent) [JavaDoc] [Source code]

Properties:

  • tokens: ["T", "A", "C", "C", "G", "G", "G", "T", "T", "T", "T", "T", "C", "C", "A", "C", "T", "C", "C", "G", "G", "G", "A", "C", "G", "C", "C", "T", "C", "T", "T", "T", "G", "A", "C", "C", "A", "G", "C", "G", "T", "T", "T", "C", "G", "G", "C", "G", "A", "A", "G", "G", "G", "C", "T", "G", "C", "T", "T", "G"]

SEQUENCE.END (info.bioinfweb.jphyloio.events.PartEndEvent) [JavaDoc] [Source code]

Properties:

  • terminated: true

SEQUENCE.START (info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "Homo_sapiens"
  • id: "seq1"
  • linkedID: null

SEQUENCE_TOKENS.SOLE (info.bioinfweb.jphyloio.events.SequenceTokensEvent) [JavaDoc] [Source code]

Properties:

  • tokens: ["A", "C", "T", "G", "C", "A", "A", "C", "G", "C", "G", "G", "A", "G", "G", "A", "G", "C", "A", "G", "G", "A", "T", "G", "G", "A", "G", "A", "T", "C", "C", "C", "T", "G", "T", "G", "C", "C", "T", "G", "T", "G", "C", "A", "G", "C", "C", "G", "T", "C", "T", "T", "G", "G", "C", "T", "G", "C", "G", "C"]

SEQUENCE_TOKENS.SOLE (info.bioinfweb.jphyloio.events.SequenceTokensEvent) [JavaDoc] [Source code]

Properties:

  • tokens: ["C", "G", "C", "G", "C", "C", "T", "C", "G", "G", "C", "C", "C", "C", "G", "T", "T", "G", "C", "C", "C", "G", "G", "A", "C", "T", "T", "T", "C", "G", "G", "C", "G", "C", "C", "C", "G", "G", "A", "C", "G", "C", "C", "T", "C", "T", "T", "T", "G", "A", "C", "C", "A", "G", "C", "G", "C", "T", "T", "C"]

SEQUENCE.END (info.bioinfweb.jphyloio.events.PartEndEvent) [JavaDoc] [Source code]

Properties:

  • terminated: true

SEQUENCE.START (info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "Mus_musculus"
  • id: "seq2"
  • linkedID: null

SEQUENCE_TOKENS.SOLE (info.bioinfweb.jphyloio.events.SequenceTokensEvent) [JavaDoc] [Source code]

Properties:

  • tokens: ["G", "G", "C", "A", "G", "C", "G", "T", "A", "G", "G", "A", "A", "C", "A", "G", "G", "A", "T", "G", "G", "A", "G", "A", "T", "C", "C", "C", "C", "G", "T", "G", "C", "C", "T", "G", "T", "G", "C", "A", "G", "C", "C", "T", "T", "C", "T", "T", "G", "G", "C", "T", "G", "C", "G", "C", "C", "G", "T", "G"]

SEQUENCE_TOKENS.SOLE (info.bioinfweb.jphyloio.events.SequenceTokensEvent) [JavaDoc] [Source code]

Properties:

  • tokens: ["C", "T", "T", "C", "A", "G", "C", "T", "C", "C", "T", "T", "T", "A", "C", "C", "A", "G", "G", "T", "T", "T", "C", "T", "C", "T", "G", "C", "T", "C", "C", "G", "G", "G", "A", "C", "G", "C", "C", "T", "C", "T", "T", "T", "G", "A", "C", "C", "A", "G", "C", "G", "T", "T", "T", "C", "G", "G", "C", "G"]

SEQUENCE.END (info.bioinfweb.jphyloio.events.PartEndEvent) [JavaDoc] [Source code]

Properties:

  • terminated: true

CHARACTER_SET.START (info.bioinfweb.jphyloio.events.LabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "_"
  • id: "MEGALabelCharacterSet"

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 3
  • start: 0

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 6
  • start: 5

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 9
  • start: 6

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 10
  • start: 9

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 11
  • start: 10

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 12
  • start: 11

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 15
  • start: 12

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 16
  • start: 15

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 17
  • start: 16

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 18
  • start: 17

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 21
  • start: 18

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 22
  • start: 21

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 23
  • start: 22

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 24
  • start: 23

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 27
  • start: 24

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 28
  • start: 27

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 29
  • start: 28

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 30
  • start: 29

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 33
  • start: 30

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 34
  • start: 33

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 36
  • start: 35

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 39
  • start: 36

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 42
  • start: 39

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 48
  • start: 42

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 51
  • start: 50

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 54
  • start: 51

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 55
  • start: 54

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 56
  • start: 55

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 57
  • start: 56

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 60
  • start: 57

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 61
  • start: 60

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 62
  • start: 61

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 63
  • start: 62

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 66
  • start: 63

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 67
  • start: 66

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 68
  • start: 67

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 69
  • start: 68

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 72
  • start: 69

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 73
  • start: 72

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 74
  • start: 73

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 75
  • start: 74

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 78
  • start: 75

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 79
  • start: 78

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 81
  • start: 80

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 84
  • start: 81

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 87
  • start: 84

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 93
  • start: 87

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 96
  • start: 95

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 99
  • start: 96

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 100
  • start: 99

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 101
  • start: 100

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 102
  • start: 101

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 105
  • start: 102

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 106
  • start: 105

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 107
  • start: 106

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 108
  • start: 107

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 111
  • start: 108

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 112
  • start: 111

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 113
  • start: 112

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 114
  • start: 113

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 117
  • start: 114

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 118
  • start: 117

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 119
  • start: 118

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 120
  • start: 119

CHARACTER_SET.END (info.bioinfweb.jphyloio.events.PartEndEvent) [JavaDoc] [Source code]

Properties:

  • terminated: false

CHARACTER_SET.START (info.bioinfweb.jphyloio.events.LabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "Domain=Data property=Coding CodonStart=1"
  • id: "DOMAIN.Data"

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 120
  • start: 0

CHARACTER_SET.END (info.bioinfweb.jphyloio.events.PartEndEvent) [JavaDoc] [Source code]

Properties:

  • terminated: false

ALIGNMENT.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

DOCUMENT.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]


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