JPhyloIO event lister

Source: https://secure.bioinfweb.info/Code/svn/JPhyloIO/trunk/demo/info.bioinfweb.jphyloio.demo.eventwebview/data/examples/PDE/MSACharSet.pde

JPhyloIO version: 0.5.3-1657 alpha

Event stream

DOCUMENT.START (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

COMMENT.SOLE (info.bioinfweb.jphyloio.events.CommentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • content: " Generated by PhyDE 0.9971 Wed Jun 08 15:53:11 CEST 2016 "

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}string, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/Formats/PDE/Predicates/}Description, null)

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

OTU_LIST.START (info.bioinfweb.jphyloio.events.LabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: null

OTU.START (info.bioinfweb.jphyloio.events.LabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "C"

OTU.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

OTU.START (info.bioinfweb.jphyloio.events.LabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "B"

OTU.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

OTU.START (info.bioinfweb.jphyloio.events.LabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "A"

OTU.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

OTU_LIST.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

ALIGNMENT.START (info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • linkedID: "otus1"

TOKEN_SET_DEFINITION.START (info.bioinfweb.jphyloio.events.TokenSetDefinitionEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • setType: DNA

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 20
  • start: 0

TOKEN_SET_DEFINITION.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

CHARACTER_SET.START (info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "charSet1"
  • linkedID: "matrix5"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/Formats/PDE/Predicates/}CharSetVisibility, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: true
  • stringValue: "true"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • sequenceType: SIMPLE
  • originalType: null
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/Formats/PDE/Predicates/}CharSetColor, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: java.awt.Color[r=252,g=61,b=51]
  • stringValue: "FC3D33"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 2
  • start: 1

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 14
  • start: 3

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 18
  • start: 15

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 20
  • start: 19

CHARACTER_SET.END (info.bioinfweb.jphyloio.events.PartEndEvent) [JavaDoc] [Source code]

Properties:

  • terminated: true

CHARACTER_SET.START (info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "charSet2"
  • linkedID: "matrix5"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/Formats/PDE/Predicates/}CharSetVisibility, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • sequenceType: SIMPLE
  • originalType: null
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/Formats/PDE/Predicates/}CharSetColor, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: java.awt.Color[r=255,g=255,b=51]
  • stringValue: "FFFF33"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 9
  • start: 4

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 11
  • start: 10

CHARACTER_SET_INTERVAL.SOLE (info.bioinfweb.jphyloio.events.CharacterSetIntervalEvent) [JavaDoc] [Source code]

Properties:

  • end: 20
  • start: 12

CHARACTER_SET.END (info.bioinfweb.jphyloio.events.PartEndEvent) [JavaDoc] [Source code]

Properties:

  • terminated: true

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}int, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}characterCount, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: 20
  • stringValue: "20"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}int, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}sequenceCount, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: 3
  • stringValue: "3"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

SEQUENCE.START (info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "C"
  • linkedID: "otu2"

SEQUENCE_TOKENS.SOLE (info.bioinfweb.jphyloio.events.SequenceTokensEvent) [JavaDoc] [Source code]

Properties:

  • tokens: ["A", "C", "T", "G", "A", "C", "T", "G", "A", "C", "T", "G", "T", "G", "A", "C", "C", "A", "T", "A"]

SEQUENCE.END (info.bioinfweb.jphyloio.events.PartEndEvent) [JavaDoc] [Source code]

Properties:

  • terminated: true

SEQUENCE.START (info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "B"
  • linkedID: "otu3"

SEQUENCE_TOKENS.SOLE (info.bioinfweb.jphyloio.events.SequenceTokensEvent) [JavaDoc] [Source code]

Properties:

  • tokens: ["A", "C", "T", "G", "A", "C", "T", "G", "A", "C", "T", "G", "T", "G", "A", "C", "C", "A", "T", "A"]

SEQUENCE.END (info.bioinfweb.jphyloio.events.PartEndEvent) [JavaDoc] [Source code]

Properties:

  • terminated: true

SEQUENCE.START (info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "A"
  • linkedID: "otu4"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • sequenceType: SIMPLE
  • originalType: (null, STRING)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/Formats/PDE/Predicates/}SequenceComment, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: "some sequence"
  • stringValue: "some sequence"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

SEQUENCE_TOKENS.SOLE (info.bioinfweb.jphyloio.events.SequenceTokensEvent) [JavaDoc] [Source code]

Properties:

  • tokens: ["A", "C", "T", "G", "A", "C", "T", "G", "A", "C", "T", "G", "T", "G", "A", "C", "C", "A", "T", "A"]

SEQUENCE.END (info.bioinfweb.jphyloio.events.PartEndEvent) [JavaDoc] [Source code]

Properties:

  • terminated: true

ALIGNMENT.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

DOCUMENT.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]


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