JPhyloIO event lister

Source: https://secure.bioinfweb.info/Code/svn/JPhyloIO/trunk/demo/info.bioinfweb.jphyloio.demo.eventwebview/data/examples/phyloXML/LargeExample.xml

JPhyloIO version: 0.5.4-1672 alpha

Event stream

DOCUMENT.START (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

TREE_NETWORK_GROUP.START (info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "treesOrNetworks0"
  • linkedID: null

NETWORK.START (info.bioinfweb.jphyloio.events.LabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "example from Prof. Joe Felsenstein's book "Inferring Phylogenies""
  • id: "network1"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta2"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}token, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Phylogeny.Description, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: null
  • stringValue: "phyloXML allows to use either a "branch_length" attribute or element to indicate branch lengths."

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "A"
  • id: "n5"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "B"
  • id: "n6"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "n4"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e7"
  • length: 0.102
  • targetID: "n5"
  • sourceID: "n4"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta8"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e9"
  • length: 0.23
  • targetID: "n6"
  • sourceID: "n4"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta10"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "C"
  • id: "n11"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "n3"
  • linkedID: null
  • rootNode: true

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e12"
  • length: 0.06
  • targetID: "n4"
  • sourceID: "n3"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta13"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e14"
  • length: 0.4
  • targetID: "n11"
  • sourceID: "n3"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta15"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NETWORK.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NETWORK.START (info.bioinfweb.jphyloio.events.LabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "example from Prof. Joe Felsenstein's book "Inferring Phylogenies""
  • id: "network16"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta17"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}token, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Phylogeny.Description, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: null
  • stringValue: "phyloXML allows to use either a "branch_length" attribute or element to indicate branch lengths."

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "A"
  • id: "n20"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "B"
  • id: "n21"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "n19"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e22"
  • length: 0.102
  • targetID: "n20"
  • sourceID: "n19"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta23"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e24"
  • length: 0.23
  • targetID: "n21"
  • sourceID: "n19"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta25"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "C"
  • id: "n26"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "n18"
  • linkedID: null
  • rootNode: true

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e27"
  • length: 0.06
  • targetID: "n19"
  • sourceID: "n18"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta28"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e29"
  • length: 0.4
  • targetID: "n26"
  • sourceID: "n18"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta30"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NETWORK.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NETWORK.START (info.bioinfweb.jphyloio.events.LabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "same example, with support of type "bootstrap""
  • id: "network31"

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "A"
  • id: "n37"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "B"
  • id: "n38"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "AB"
  • id: "n33"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e39"
  • length: 0.102
  • targetID: "n37"
  • sourceID: "n33"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta40"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e41"
  • length: 0.23
  • targetID: "n38"
  • sourceID: "n33"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta42"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "C"
  • id: "n43"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "n32"
  • linkedID: null
  • rootNode: true

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e44"
  • length: 0.06
  • targetID: "n33"
  • sourceID: "n32"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta45"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta34"
  • about: null
  • hRef: null
  • rel: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Confidence, null)

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta35"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}token, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Confidence.Type, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: "bootstrap"
  • stringValue: "bootstrap"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta36"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}double, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Confidence.Value, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: 89.0
  • stringValue: "89"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e46"
  • length: 0.4
  • targetID: "n43"
  • sourceID: "n32"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta47"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NETWORK.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NETWORK.START (info.bioinfweb.jphyloio.events.LabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "same example, with species and sequence"
  • id: "network48"

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "A"
  • id: "n51"
  • linkedID: null
  • rootNode: false

RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta52"
  • about: null
  • hRef: null
  • rel: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Taxonomy, null)

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta53"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}token, null)
  • alternativeStringValue: null
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LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NETWORK.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NETWORK.START (info.bioinfweb.jphyloio.events.LabeledIDEvent) [JavaDoc] [Source code]

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NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

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RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

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RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Taxonomy.ScientificName, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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RESOURCE_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

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LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

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RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

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  • rel: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Taxonomy, null)

RESOURCE_META.START (info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent) [JavaDoc] [Source code]

Properties:

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LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

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LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

RESOURCE_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

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LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

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  • linkedID: null
  • rootNode: true

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e209"
  • length: NaN
  • targetID: "n147"
  • sourceID: "n146"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta210"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e211"
  • length: NaN
  • targetID: "n190"
  • sourceID: "n146"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta212"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NETWORK.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NETWORK.START (info.bioinfweb.jphyloio.events.LabeledIDEvent) [JavaDoc] [Source code]

Properties:

  • label: "network, node B is connected to TWO nodes: AB and C"
  • id: "network213"

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "A"
  • id: "n217"
  • linkedID: null
  • rootNode: false

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta218"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}token, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}IDSource, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: "a"
  • stringValue: "a"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "B"
  • id: "n219"
  • linkedID: null
  • rootNode: false

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta220"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}token, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}IDSource, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: "b"
  • stringValue: "b"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "AB"
  • id: "n215"
  • linkedID: null
  • rootNode: false

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta216"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}token, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}IDSource, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: "ab"
  • stringValue: "ab"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e221"
  • length: 0.102
  • targetID: "n217"
  • sourceID: "n215"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta222"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e223"
  • length: 0.23
  • targetID: "n219"
  • sourceID: "n215"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta224"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: "C"
  • id: "n225"
  • linkedID: null
  • rootNode: false

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta226"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}token, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}IDSource, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: "c"
  • stringValue: "c"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NODE.START (info.bioinfweb.jphyloio.events.NodeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "n214"
  • linkedID: null
  • rootNode: false

NODE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e227"
  • length: 0.06
  • targetID: "n215"
  • sourceID: "n214"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta228"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e229"
  • length: 0.4
  • targetID: "n225"
  • sourceID: "n214"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta230"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: false
  • stringValue: "false"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.START (info.bioinfweb.jphyloio.events.EdgeEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "e231"
  • length: NaN
  • targetID: "n225"
  • sourceID: "n219"

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta232"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}boolean, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: true
  • stringValue: "true"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

LITERAL_META.START (info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent) [JavaDoc] [Source code]

Properties:

  • label: null
  • id: "meta233"
  • sequenceType: SIMPLE
  • originalType: ({http://www.w3.org/2001/XMLSchema}token, null)
  • alternativeStringValue: null
  • predicate: ({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}CladeRelation.Type, null)

LITERAL_META_CONTENT.SOLE (info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent) [JavaDoc] [Source code]

Properties:

  • continuedInNextEvent: false
  • objectValue: "network_connection"
  • stringValue: "network_connection"

LITERAL_META.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

EDGE.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

NETWORK.END (info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent) [JavaDoc] [Source code]

JPhyloIO event lister

JPhyloIO event lister

Source: https://secure.bioinfweb.info/Code/svn/JPhyloIO/trunk/demo/info.bioinfweb.jphyloio.demo.eventwebview/data/examples/phyloXML/LargeExample.xml

JPhyloIO version: 0.5.4-1672 alpha

Event stream

Exception when processing the file

The following exception occurred when trying to read the specified file. This is mostly caused by an invalid input file. If you think it is caused by an actual bug in JPhyloIO, please file a bug report with a description of the problem.

The content of this property tag could not be parsed to class BigInteger.

info.bioinfweb.jphyloio.exception.JPhyloIOReaderException: The content of this property tag could not be parsed to class BigInteger.
	at info.bioinfweb.jphyloio.formats.phyloxml.PhyloXMLEventReader$3.readEvent(Unknown Source)
	at info.bioinfweb.jphyloio.formats.phyloxml.PhyloXMLEventReader$3.readEvent(Unknown Source)
	at info.bioinfweb.jphyloio.formats.xml.AbstractXMLEventReader.readNextEvent(Unknown Source)
	at info.bioinfweb.jphyloio.AbstractEventReader.getNextEventFromQueue(Unknown Source)
	at info.bioinfweb.jphyloio.AbstractEventReader.next(Unknown Source)
	at info.bioinfweb.jphyloio.demo.eventwebview.EventListerServlet.outputEvents(EventListerServlet.java:176)
	at info.bioinfweb.jphyloio.demo.eventwebview.EventListerServlet.processStream(EventListerServlet.java:207)
	at info.bioinfweb.jphyloio.demo.eventwebview.EventListerServlet.doGet(EventListerServlet.java:246)
	at javax.servlet.http.HttpServlet.service(HttpServlet.java:634)
	at javax.servlet.http.HttpServlet.service(HttpServlet.java:741)
	at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:231)
	at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)
	at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:53)
	at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:193)
	at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)
	at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:202)
	at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:96)
	at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:490)
	at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:139)
	at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:92)
	at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:678)
	at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:74)
	at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:343)
	at org.apache.coyote.ajp.AjpProcessor.service(AjpProcessor.java:394)
	at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:66)
	at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:853)
	at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1587)
	at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
	at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
	at java.lang.Thread.run(Thread.java:748)