JPhyloIO event lister
Source: https://secure.bioinfweb.info/Code/svn/JPhyloIO/trunk/demo/info.bioinfweb.jphyloio.demo.eventwebview/data/examples/phyloXML/LargeExample.xml
JPhyloIO version: 0.5.3-1657 alpha
Event stream
DOCUMENT.START
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
TREE_NETWORK_GROUP.START
(info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "treesOrNetworks0"
- linkedID:
null
NETWORK.START
(info.bioinfweb.jphyloio.events.LabeledIDEvent)
[JavaDoc]
[Source code]
Properties:
- label: "example from Prof. Joe Felsenstein's book "Inferring Phylogenies""
- id: "network1"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta2"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Phylogeny.Description, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
null
- stringValue: "phyloXML allows to use either a "branch_length" attribute or element to indicate branch lengths."
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "A"
- id: "n5"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "B"
- id: "n6"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "n4"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e7"
- length:
0.102
- targetID: "n5"
- sourceID: "n4"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta8"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e9"
- length:
0.23
- targetID: "n6"
- sourceID: "n4"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta10"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "C"
- id: "n11"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "n3"
- linkedID:
null
- rootNode:
true
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e12"
- length:
0.06
- targetID: "n4"
- sourceID: "n3"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta13"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e14"
- length:
0.4
- targetID: "n11"
- sourceID: "n3"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta15"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NETWORK.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NETWORK.START
(info.bioinfweb.jphyloio.events.LabeledIDEvent)
[JavaDoc]
[Source code]
Properties:
- label: "example from Prof. Joe Felsenstein's book "Inferring Phylogenies""
- id: "network16"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta17"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Phylogeny.Description, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
null
- stringValue: "phyloXML allows to use either a "branch_length" attribute or element to indicate branch lengths."
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "A"
- id: "n20"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "B"
- id: "n21"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "n19"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e22"
- length:
0.102
- targetID: "n20"
- sourceID: "n19"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta23"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e24"
- length:
0.23
- targetID: "n21"
- sourceID: "n19"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta25"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "C"
- id: "n26"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "n18"
- linkedID:
null
- rootNode:
true
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e27"
- length:
0.06
- targetID: "n19"
- sourceID: "n18"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta28"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e29"
- length:
0.4
- targetID: "n26"
- sourceID: "n18"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta30"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NETWORK.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NETWORK.START
(info.bioinfweb.jphyloio.events.LabeledIDEvent)
[JavaDoc]
[Source code]
Properties:
- label: "same example, with support of type "bootstrap""
- id: "network31"
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "A"
- id: "n37"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "B"
- id: "n38"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "AB"
- id: "n33"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e39"
- length:
0.102
- targetID: "n37"
- sourceID: "n33"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta40"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e41"
- length:
0.23
- targetID: "n38"
- sourceID: "n33"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta42"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "C"
- id: "n43"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "n32"
- linkedID:
null
- rootNode:
true
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e44"
- length:
0.06
- targetID: "n33"
- sourceID: "n32"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta45"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta34"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Confidence, null)
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta35"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Confidence.Type, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue: "bootstrap"
- stringValue: "bootstrap"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta36"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}double, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Confidence.Value, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
89.0
- stringValue: "89"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e46"
- length:
0.4
- targetID: "n43"
- sourceID: "n32"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta47"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NETWORK.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NETWORK.START
(info.bioinfweb.jphyloio.events.LabeledIDEvent)
[JavaDoc]
[Source code]
Properties:
- label: "same example, with species and sequence"
- id: "network48"
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "A"
- id: "n51"
- linkedID:
null
- rootNode:
false
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta52"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Taxonomy, null)
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta53"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Taxonomy.ScientificName, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue: "E. coli"
- stringValue: "E. coli"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta54"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Sequence, null)
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta55"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation, null)
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta56"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation.Desc, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
null
- stringValue: "alcohol dehydrogenase"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta57"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation.Confidence, null)
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta58"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation.Confidence.Type, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue: "probability"
- stringValue: "probability"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta59"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}double, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation.Confidence.Value, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
0.99
- stringValue: "0.99"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "B"
- id: "n60"
- linkedID:
null
- rootNode:
false
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta61"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Taxonomy, null)
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta62"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Taxonomy.ScientificName, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue: "B. subtilis"
- stringValue: "B. subtilis"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta63"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Sequence, null)
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta64"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation, null)
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta65"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation.Desc, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
null
- stringValue: "alcohol dehydrogenase"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta66"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation.Confidence, null)
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta67"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation.Confidence.Type, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue: "probability"
- stringValue: "probability"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta68"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}double, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation.Confidence.Value, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
0.91
- stringValue: "0.91"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "AB"
- id: "n50"
- linkedID:
null
- rootNode:
false
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e69"
- length:
NaN
- targetID: "n51"
- sourceID: "n50"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta70"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e71"
- length:
NaN
- targetID: "n60"
- sourceID: "n50"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta72"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label: "C"
- id: "n73"
- linkedID:
null
- rootNode:
false
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta74"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Taxonomy, null)
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta75"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Taxonomy.ScientificName, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue: "C. elegans"
- stringValue: "C. elegans"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta76"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Sequence, null)
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta77"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation, null)
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta78"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation.Desc, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
null
- stringValue: "alcohol dehydrogenase"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.START
(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta79"
- about:
null
- hRef:
null
- rel:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation.Confidence, null)
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta80"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation.Confidence.Type, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue: "probability"
- stringValue: "probability"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta81"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}double, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}Annotation.Confidence.Value, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
0.67
- stringValue: "0.67"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
RESOURCE_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NODE.START
(info.bioinfweb.jphyloio.events.NodeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "n49"
- linkedID:
null
- rootNode:
true
NODE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e82"
- length:
NaN
- targetID: "n50"
- sourceID: "n49"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta83"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.START
(info.bioinfweb.jphyloio.events.EdgeEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "e84"
- length:
NaN
- targetID: "n73"
- sourceID: "n49"
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta85"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}boolean, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/General/Predicates/}isCrosslink, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
false
- stringValue: "false"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NETWORK.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NETWORK.START
(info.bioinfweb.jphyloio.events.LabeledIDEvent)
[JavaDoc]
[Source code]
Properties:
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[Source code]
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(info.bioinfweb.jphyloio.events.meta.ResourceMetadataEvent)
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[Source code]
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(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue:
true
- stringValue: "true"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
LITERAL_META.START
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent)
[JavaDoc]
[Source code]
Properties:
- label:
null
- id: "meta233"
- sequenceType:
SIMPLE
- originalType:
({http://www.w3.org/2001/XMLSchema}token, null)
- alternativeStringValue:
null
- predicate:
({http://bioinfweb.info/xmlns/JPhyloIO/PhyloXML/Predicates/}CladeRelation.Type, null)
LITERAL_META_CONTENT.SOLE
(info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent)
[JavaDoc]
[Source code]
Properties:
- continuedInNextEvent:
false
- objectValue: "network_connection"
- stringValue: "network_connection"
LITERAL_META.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
EDGE.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
NETWORK.END
(info.bioinfweb.jphyloio.events.ConcreteJPhyloIOEvent)
[JavaDoc]
[Source code]
JPhyloIO event lister
Source: https://secure.bioinfweb.info/Code/svn/JPhyloIO/trunk/demo/info.bioinfweb.jphyloio.demo.eventwebview/data/examples/phyloXML/LargeExample.xml
JPhyloIO version: 0.5.3-1657 alpha
Event stream
Exception when processing the file
The following exception occurred when trying to read the specified file. This is mostly caused by an invalid input file. If you think it is caused by an actual bug in JPhyloIO, please file a bug report with a description of the problem.
The content of this property tag could not be parsed to class BigInteger.
info.bioinfweb.jphyloio.exception.JPhyloIOReaderException: The content of this property tag could not be parsed to class BigInteger. at info.bioinfweb.jphyloio.formats.phyloxml.PhyloXMLEventReader$3.readEvent(Unknown Source) at info.bioinfweb.jphyloio.formats.phyloxml.PhyloXMLEventReader$3.readEvent(Unknown Source) at info.bioinfweb.jphyloio.formats.xml.AbstractXMLEventReader.readNextEvent(Unknown Source) at info.bioinfweb.jphyloio.AbstractEventReader.getNextEventFromQueue(Unknown Source) at info.bioinfweb.jphyloio.AbstractEventReader.next(Unknown Source) at info.bioinfweb.jphyloio.demo.eventwebview.EventListerServlet.outputEvents(EventListerServlet.java:176) at info.bioinfweb.jphyloio.demo.eventwebview.EventListerServlet.processStream(EventListerServlet.java:207) at info.bioinfweb.jphyloio.demo.eventwebview.EventListerServlet.doGet(EventListerServlet.java:246) at javax.servlet.http.HttpServlet.service(HttpServlet.java:655) at javax.servlet.http.HttpServlet.service(HttpServlet.java:764) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:227) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162) at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:53) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:189) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:162) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:197) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:97) at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:540) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:135) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:92) at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:687) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:78) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:359) at org.apache.coyote.ajp.AjpProcessor.service(AjpProcessor.java:433) at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:65) at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:889) at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1735) at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49) at org.apache.tomcat.util.threads.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1191) at org.apache.tomcat.util.threads.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:659) at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61) at java.base/java.lang.Thread.run(Thread.java:829)