AlignmentModel.See: Description
| Interface | Description |
|---|---|
| AlignmentModelFactory<T> |
Interface to be implemented by classes creating instance of implementations of
AlignmentModel. |
| Class | Description |
|---|---|
| AbstractAlignmentModelFactory<T> |
Implements shared functionality for alignment model factories.
|
| BioPolymerCharAlignmentModelFactory |
Creates instances of
PackedAlignmentModel using a CharacterTokenSet for
nucleotide or amino acid data. |
| NewAlignmentModelParameterMap |
Parameter map that stores information used to create new instances of alignment models by implementations
of
AlignmentModelFactory. |
| StringAlignmentModelFactory |
Default factory implementation for creating alignment models.
|
| TokenDefinition |
Models the definition of a token.
|
AlignmentModel.