| Class | Description |
|---|---|
| AbstractAlignmentModelDecorator<T,U> |
Basic implementation of
AlignmentModelView which delegates sequence specific methods
(which are independent of the token type) to the underlying model. |
| AbstractTokenReplacementAlignmentModelDecorator<T,U> |
Abstract base class for implementations of
AlignmentModelView that simply replace a set
of tokens by other tokens of the same type. |
| DelegatedAlignmentModelView<T> |
Implementation of
AlignmentModelView that delegates all methods to the underlying model
and uses the same token type as the underlying model. |
| DNAAlignmentModelDecorator<T,U> |
Shows the underlying nucleotide data source as a DNA sequence, i.e.
|
| RNAAlignmentModelDecorator<T,U> |
Shows the underlying nucleotide data source as a RNA sequence, i.e.
|