info.bioinfweb.libralign.model.io

Class TokenSetAdapter<T>

java.lang.Object

info.bioinfweb.libralign.model.io.TokenSetAdapter<T>

All Implemented Interfaces:

info.bioinfweb.jphyloio.dataadapters.ObjectListDataAdapter<info.bioinfweb.jphyloio.events.TokenSetDefinitionEvent>

public class TokenSetAdapter<T>
extends java.lang.Object
implements info.bioinfweb.jphyloio.dataadapters.ObjectListDataAdapter<info.bioinfweb.jphyloio.events.TokenSetDefinitionEvent>

Constructor Summary

Constructors

Constructor and Description
TokenSetAdapter(java.lang.String idPrefix, TokenSet<T> tokenSet, long startIndex, long endIndex)

Method Summary

Modifier and Type	Method and Description
long	getCount(info.bioinfweb.jphyloio.ReadWriteParameterMap parameters)
java.util.Iterator<java.lang.String>	getIDIterator(info.bioinfweb.jphyloio.ReadWriteParameterMap parameters)
java.lang.String	getIDPrefix()
info.bioinfweb.jphyloio.events.TokenSetDefinitionEvent	getObjectStartEvent(info.bioinfweb.jphyloio.ReadWriteParameterMap parameters, java.lang.String id)
TokenSet<T>	getTokenSet()
void	writeContentData(info.bioinfweb.jphyloio.ReadWriteParameterMap parameters, info.bioinfweb.jphyloio.dataadapters.JPhyloIOEventReceiver receiver, java.lang.String id)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

TokenSetAdapter

public TokenSetAdapter(java.lang.String idPrefix,
                       TokenSet<T> tokenSet,
                       long startIndex,
                       long endIndex)

Method Detail

getIDPrefix

public java.lang.String getIDPrefix()

getTokenSet

public TokenSet<T> getTokenSet()

getObjectStartEvent

public info.bioinfweb.jphyloio.events.TokenSetDefinitionEvent getObjectStartEvent(info.bioinfweb.jphyloio.ReadWriteParameterMap parameters,
                                                                                  java.lang.String id)
                                                                           throws java.lang.IllegalArgumentException

Specified by:

getObjectStartEvent in interface info.bioinfweb.jphyloio.dataadapters.ObjectListDataAdapter<info.bioinfweb.jphyloio.events.TokenSetDefinitionEvent>

Throws:

java.lang.IllegalArgumentException

getCount

public long getCount(info.bioinfweb.jphyloio.ReadWriteParameterMap parameters)

Specified by:

getCount in interface info.bioinfweb.jphyloio.dataadapters.ObjectListDataAdapter<info.bioinfweb.jphyloio.events.TokenSetDefinitionEvent>

getIDIterator

public java.util.Iterator<java.lang.String> getIDIterator(info.bioinfweb.jphyloio.ReadWriteParameterMap parameters)

Specified by:

getIDIterator in interface info.bioinfweb.jphyloio.dataadapters.ObjectListDataAdapter<info.bioinfweb.jphyloio.events.TokenSetDefinitionEvent>

writeContentData

public void writeContentData(info.bioinfweb.jphyloio.ReadWriteParameterMap parameters,
                             info.bioinfweb.jphyloio.dataadapters.JPhyloIOEventReceiver receiver,
                             java.lang.String id)
                      throws java.io.IOException,
                             java.lang.IllegalArgumentException

Specified by:

writeContentData in interface info.bioinfweb.jphyloio.dataadapters.ObjectListDataAdapter<info.bioinfweb.jphyloio.events.TokenSetDefinitionEvent>

Throws:

java.io.IOException

java.lang.IllegalArgumentException