info.bioinfweb.libralign.pherogram

Enum PherogramFormats.QualityOutputType

java.lang.Object

java.lang.Enum<PherogramFormats.QualityOutputType>

info.bioinfweb.libralign.pherogram.PherogramFormats.QualityOutputType

All Implemented Interfaces:

java.io.Serializable, java.lang.Comparable<PherogramFormats.QualityOutputType>

Enclosing class:

PherogramFormats

public static enum PherogramFormats.QualityOutputType
extends java.lang.Enum<PherogramFormats.QualityOutputType>

Enumeration that determines the way quality scores are displays in an

Author:

Ben Stöver

Enum Constant Summary

Enum Constants

Enum Constant and Description
ALL Displays quality values for all four nucleotides.
MAXIMUM Displays only the quality value for the nucleotide that has been called.
NONE Does not display any quality values.

Method Summary

Modifier and Type	Method and Description
static PherogramFormats.QualityOutputType	valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static PherogramFormats.QualityOutputType[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

NONE

public static final PherogramFormats.QualityOutputType NONE

Does not display any quality values.

MAXIMUM

public static final PherogramFormats.QualityOutputType MAXIMUM

Displays only the quality value for the nucleotide that has been called.

ALL

public static final PherogramFormats.QualityOutputType ALL

Displays quality values for all four nucleotides.

Method Detail

values

public static PherogramFormats.QualityOutputType[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (PherogramFormats.QualityOutputType c : PherogramFormats.QualityOutputType.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static PherogramFormats.QualityOutputType valueOf(java.lang.String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

java.lang.IllegalArgumentException - if this enum type has no constant with the specified name

java.lang.NullPointerException - if the argument is null