Documentation (Main Page)

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LibrAlign is a Java library providing powerful GUI components that allow displaying multiple sequence alignments or single sequences including any type of attached raw or metadata.

  • Alignment GUI components display one or multiple related multiple sequence alignments or also a single sequence.
  • Data areas display any type of raw or meta data attached to a sequence or a whole alignment. For new data types additional custom data areas can easily be created.
  • Alignment and data models store the data displayed in the alignment components and data areas.

Note that this documentation may still undergo changes before the release of LibrAlign 1.0, since API changes may happen during that time.

API documentation

This wiki gives an introduction and overview on LibrAlign. A detailed documentation of all LibrAlignclasses can be found in the API documentation:

Supported GUI toolkits

LibrAlign makes use of the bioinfweb library TIC, which allows to provide all GUI components in a Swing and a SWT version. Therefore LibrAlign integrates into the look and feel of any Swing or SWT/Eclipse RCP application, while still offering identical functionality. See Working with toolkits for details.

Components

LibrAlign is separated into several components for different purposes.