See: Description
| Interface | Description |
|---|---|
| JPhyloIOEvent |
This interface is implemented by all events generated by implementations of
JPhyloIOEventReader. |
| LinkedIDEvent |
Interface to be implemented by event objects that can link previous events by their ID.
|
| Class | Description |
|---|---|
| CharacterDefinitionEvent |
Event that indicates a defined character (alignment column).
|
| CharacterSetIntervalEvent |
Event that indicates that new information on a character set has been read.
|
| CommentEvent |
Event that indicates that a comment has been parsed at the current position or within the data the last
non-comment event has been parsed from.
|
| ConcreteJPhyloIOEvent |
Implements basic functionality for
JPhyloIOEvents. |
| ContinuedEvent |
Base class for events that have a content that may be split across separate subsequent events, if it is large.
|
| EdgeEvent |
Event indicating an edge in a tree or network.
|
| LabeledEvent | |
| LabeledIDEvent |
Event that indicate data objects that carry an unique ID and a label.
|
| LinkedLabeledIDEvent |
Instances of this class model data elements with an ID and an optional label, that link another data
element in a phylogenetic document.
|
| NodeEvent |
Event indicating a node in a tree or network.
|
| PartEndEvent |
Indicates the end of a part of a sequence or character set definition.
|
| SequenceTokensEvent |
Indicates that one or more sequence tokens have been read from an alignment.
|
| SetElementEvent |
Event object that models an ID-based link to an object that is contained in set.
|
| SingleSequenceTokenEvent | |
| SingleTokenDefinitionEvent |
Event that indicates the definition of a single new valid token that could be contained in a sequence
of the current alignment.
|
| TokenSetDefinitionEvent |
Event that indicates that a (predefined) definition of a character state set was found in the parsed file.
|
| UnknownCommandEvent |
Event to be fired, if an unknown command was found (e.g.
|