Package | Description |
---|---|
info.bioinfweb.jphyloio |
The main package of JPhyloIO.
|
info.bioinfweb.jphyloio.formats.nexml |
Contains classes for reading from and writing to streams/files in NeXML format.
|
info.bioinfweb.jphyloio.formats.nexml.elementreader |
Contains implementations of
XMLElementReader used by
NeXMLEventReader . |
Modifier and Type | Method and Description |
---|---|
TokenTranslationStrategy |
ReadWriteParameterMap.getTranslateTokens() |
Modifier and Type | Method and Description |
---|---|
TokenTranslationStrategy |
NeXMLEventReader.getTranslateTokens() |
static TokenTranslationStrategy |
TokenTranslationStrategy.valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name.
|
static TokenTranslationStrategy[] |
TokenTranslationStrategy.values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
Modifier and Type | Method and Description |
---|---|
protected java.util.List<java.lang.String> |
AbstractNeXMLElementReader.readSequence(NeXMLReaderStreamDataProvider streamDataProvider,
java.lang.String sequence,
TokenTranslationStrategy translateTokens)
Parses a sequence string to a list of single tokens by using the provided
TokenTranslationStrategy . |