NexusCommandEventReader
for commands that are valid in all Nexus blocks.See: Description
| Interface | Description |
|---|---|
| NexusBlockHandler |
A Nexus block handler implements methods that shall be executed by
NexusEventReader
each time an according block BEGIN or END command is read. |
| Class | Description |
|---|---|
| AbstractNexusBlockHandler |
Abstract implementation of
NexusBlockHandler that stores a set of block names
in an unmodifiable collection. |
| CharactersDataUnalignedBlockHandler |
A Nexus block handler to read sequence data from the
CHARACTERS, DATA or UNALIGNED
blocks. |
| ENewickNetworksBlockHandler |
A Nexus block handler to read phylogenetic networks from a
NETWORK block containing network definitions
in the eNewick format. |
| NexusBlockHandlerMap |
Manages Nexus block handlers for an instance of
NexusEventReader. |
| TaxaBlockHandler | |
| TreesBlockHandler |
NexusCommandEventReader
for commands that are valid in all Nexus blocks.