| Package | Description |
|---|---|
| info.bioinfweb.libralign.alignmentarea |
Contains basic implementations for displaying an alignment area.
|
| info.bioinfweb.libralign.alignmentarea.content |
Contains classes related to
AlignmentContentArea which display
the contents of an alignment. |
| info.bioinfweb.libralign.dataarea |
Contains
DataArea from which all data areas used in LibrAlign
must be inherited as well as related classes and a set of general data area implementations provided with
LibrAlign which are located in the subpackage implementations. |
| info.bioinfweb.libralign.dataarea.implementations |
Contains classes that implement a concrete data area.
|
| info.bioinfweb.libralign.dataarea.implementations.charset |
Contains data area related classes to display character sets of an alignment.
|
| info.bioinfweb.libralign.dataarea.implementations.pherogram |
Contains
PherogramArea and other classes used in its
implementation. |
| info.bioinfweb.libralign.dataarea.implementations.sequenceindex | |
| info.bioinfweb.libralign.multiplealignments |
Contains classes used in the implementation of
MultipleAlignmentsContainer
which allow to combine several AlignmentAreas. |
| Class and Description |
|---|
| DataAreaChangeEvent
Event that is used to indicate a change of data areas displayed inside an
AlignmentArea. |
| DataAreasModel
Manages the data areas attached to an
AlignmentArea. |
| DataAreasModelListener
This interface should be implemented by classes that want to track changes of the data areas
contained in a
AlignmentArea. |
| Class and Description |
|---|
| DataAreaList
A list of
DataArea that are displayed at a specified position in an AlignmentArea. |
| Class and Description |
|---|
| DataArea
All classes representing a data area in an
AlignmentArea must be inherited from this class. |
| DataAreaChangeEvent
Event that is used to indicate a change of data areas displayed inside an
AlignmentArea. |
| DataAreaChangeEventList
A wrapper around any implementation of
List that fires DataAreaChangeEvents. |
| DataAreaList
A list of
DataArea that are displayed at a specified position in an AlignmentArea. |
| DataAreaListType
Enumerates the types locations a
DataArea can have inside a AlignmentArea. |
| DataAreaLocation
Specified the location of a
DataArea. |
| DataAreaSequenceChangeListener
Helper class used by
DataAreasModel to inform the data areas it contains about changes in the
associated AlignmentModel. |
| DataAreasModel
Manages the data areas attached to an
AlignmentArea. |
| DataAreasModelListener
This interface should be implemented by classes that want to track changes of the data areas
contained in a
AlignmentArea. |
| Class and Description |
|---|
| DataArea
All classes representing a data area in an
AlignmentArea must be inherited from this class. |
| DataAreaListType
Enumerates the types locations a
DataArea can have inside a AlignmentArea. |
| Class and Description |
|---|
| DataArea
All classes representing a data area in an
AlignmentArea must be inherited from this class. |
| DataAreaListType
Enumerates the types locations a
DataArea can have inside a AlignmentArea. |
| Class and Description |
|---|
| DataArea
All classes representing a data area in an
AlignmentArea must be inherited from this class. |
| DataAreaListType
Enumerates the types locations a
DataArea can have inside a AlignmentArea. |
| Class and Description |
|---|
| DataArea
All classes representing a data area in an
AlignmentArea must be inherited from this class. |
| DataAreaListType
Enumerates the types locations a
DataArea can have inside a AlignmentArea. |
| Class and Description |
|---|
| DataAreaChangeEvent
Event that is used to indicate a change of data areas displayed inside an
AlignmentArea. |
| DataAreasModelListener
This interface should be implemented by classes that want to track changes of the data areas
contained in a
AlignmentArea. |