| Package | Description |
|---|---|
| info.bioinfweb.libralign.alignmentarea |
Contains basic implementations for displaying an alignment area.
|
| info.bioinfweb.libralign.dataarea |
Contains
DataArea from which all data areas used in LibrAlign
must be inherited as well as related classes and a set of general data area implementations provided with
LibrAlign which are located in the subpackage implementations. |
| info.bioinfweb.libralign.dataarea.implementations |
Contains classes that implement a concrete data area.
|
| info.bioinfweb.libralign.dataarea.implementations.charset |
Contains data area related classes to display character sets of an alignment.
|
| info.bioinfweb.libralign.dataarea.implementations.pherogram |
Contains
PherogramArea and other classes used in its
implementation. |
| info.bioinfweb.libralign.dataarea.implementations.sequenceindex | |
| info.bioinfweb.libralign.model |
Contains the
AlignmentModel interface which
is the bridge between LibrAlign and any source of alignment data that is displayed with it as well as
related classes and a set of implementations of this interface provided with LibrAlign. |
| info.bioinfweb.libralign.model.events |
Contains the event objects used by implementations of
AlignmentModel. |
| info.bioinfweb.libralign.model.implementations |
Contains common implementations of
AlignmentModel
which are part of LibrAlign. |
| info.bioinfweb.libralign.model.implementations.decorate | |
| info.bioinfweb.libralign.multiplealignments |
Contains classes used in the implementation of
MultipleAlignmentsContainer
which allow to combine several AlignmentAreas. |
| Class and Description |
|---|
| SequenceChangeEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was added or removed. |
| SequenceRenamedEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was renamed. |
| TokenChangeEvent
Event object that indicates that tokens in a sequence provided by an instance of
AlignmentModel were inserted, removed or replaced. |
| Class and Description |
|---|
| SequenceChangeEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was added or removed. |
| SequenceRenamedEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was renamed. |
| TokenChangeEvent
Event object that indicates that tokens in a sequence provided by an instance of
AlignmentModel were inserted, removed or replaced. |
| Class and Description |
|---|
| SequenceChangeEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was added or removed. |
| SequenceRenamedEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was renamed. |
| TokenChangeEvent
Event object that indicates that tokens in a sequence provided by an instance of
AlignmentModel were inserted, removed or replaced. |
| Class and Description |
|---|
| SequenceChangeEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was added or removed. |
| SequenceRenamedEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was renamed. |
| TokenChangeEvent
Event object that indicates that tokens in a sequence provided by an instance of
AlignmentModel were inserted, removed or replaced. |
| Class and Description |
|---|
| SequenceChangeEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was added or removed. |
| SequenceRenamedEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was renamed. |
| TokenChangeEvent
Event object that indicates that tokens in a sequence provided by an instance of
AlignmentModel were inserted, removed or replaced. |
| Class and Description |
|---|
| SequenceChangeEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was added or removed. |
| SequenceRenamedEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was renamed. |
| TokenChangeEvent
Event object that indicates that tokens in a sequence provided by an instance of
AlignmentModel were inserted, removed or replaced. |
| Class and Description |
|---|
| SequenceChangeEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was added or removed. |
| SequenceRenamedEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was renamed. |
| TokenChangeEvent
Event object that indicates that tokens in a sequence provided by an instance of
AlignmentModel were inserted, removed or replaced. |
| Class and Description |
|---|
| AlignmentModelChangeEvent
Event object that represents a change in the data provided by an implementation of
AlignmentModel. |
| SequenceChangeEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was added or removed. |
| SequenceRenamedEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was renamed. |
| TokenChangeEvent
Event object that indicates that tokens in a sequence provided by an instance of
AlignmentModel were inserted, removed or replaced. |
| Class and Description |
|---|
| SequenceChangeEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was added or removed. |
| SequenceRenamedEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was renamed. |
| TokenChangeEvent
Event object that indicates that tokens in a sequence provided by an instance of
AlignmentModel were inserted, removed or replaced. |
| Class and Description |
|---|
| SequenceChangeEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was added or removed. |
| SequenceRenamedEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was renamed. |
| TokenChangeEvent
Event object that indicates that tokens in a sequence provided by an instance of
AlignmentModel were inserted, removed or replaced. |
| Class and Description |
|---|
| SequenceChangeEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was added or removed. |
| SequenceRenamedEvent
Event object that indicates that a sequence provided by an instance of
AlignmentModel
was renamed. |
| TokenChangeEvent
Event object that indicates that tokens in a sequence provided by an instance of
AlignmentModel were inserted, removed or replaced. |