info.bioinfweb.libralign.pherogram.model

Class ShiftChange

java.lang.Object

info.bioinfweb.libralign.pherogram.model.ShiftChange

public class ShiftChange
extends java.lang.Object

Used by PherogramAlignmentModel to model which position in the base call sequence corresponds to which position in the editable alignment sequence.

Since:

0.2.0

Author:

Ben Stöver

Field Summary

Fields

Modifier and Type	Field and Description
protected int	baseCallIndex
protected int	shiftChange

Constructor Summary

Constructors

Constructor and Description
ShiftChange(int baseCallIndex, int shiftChange)

Method Summary

Modifier and Type	Method and Description
int	getBaseCallIndex()
int	getShiftChange()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

baseCallIndex

protected int baseCallIndex

shiftChange

protected int shiftChange

Constructor Detail

ShiftChange

public ShiftChange(int baseCallIndex,
                   int shiftChange)

Method Detail

getBaseCallIndex

public int getBaseCallIndex()

getShiftChange

public int getShiftChange()