PherogramProvider and its implementations.See: Description
| Interface | Description |
|---|---|
| PherogramComponentModelListener |
Interface to be implemented by all classes that need to be informed on changes in instances of
PherogramComponentModel. |
| Class | Description |
|---|---|
| PherogramAlignmentRelation |
A bean class storing the base call sequence position corresponding to editable sequence position or the other way
around in an alignment between the base call sequence from Sanger sequencing and the corresponding editable sequence
in an
AlignmentArea. |
| PherogramAreaModel |
The data area model of a
PherogramArea containing the pherogram source, as well as cut positions,
the column where the pherogram is attached to the editable sequence and pherogram distortion information. |
| PherogramComponentModel |
The model used by all views displaying pherograms.
|
| PherogramCutPositionChangeEvent |
Event indicating that a cut position of an instance of
PherogramComponentModel was changed. |
| PherogramFirstSeqPosChangeEvent |
Event that indicates that
PherogramAreaModel.getFirstSeqPos() was changed. |
| PherogramModelChangeEvent |
All events indicating changes in an instance of
PherogramComponentModel should be inherited
from this class. |
| PherogramProviderChangeEvent |
Change event that indicates the the pherogram provider of an instance of
PherogramComponentModel
was replaced or its contents changed. |
| ShiftChange |
Used by
PherogramAlignmentModel to model which position in the base call sequence corresponds to which
position in the editable alignment sequence. |
PherogramProvider and its implementations.