| Package | Description |
|---|---|
| info.bioinfweb.jphyloio.events |
Contains implementations of JPhyloIO events, triggered during event based parsing.
|
| info.bioinfweb.jphyloio.events.meta |
Contains event classes that model metadata, as well as related implementations.
|
| Modifier and Type | Class and Description |
|---|---|
class |
CharacterDefinitionEvent
Event that indicates a defined character (alignment column).
|
class |
EdgeEvent
Event indicating an edge in a tree or network.
|
class |
LabeledIDEvent
Event that indicate data objects that carry an unique ID and a label.
|
class |
LinkedLabeledIDEvent
Instances of this class model data elements with an ID and an optional label, that link another data
element in a phylogenetic document.
|
class |
NodeEvent
Event indicating a node in a tree or network.
|
class |
SingleSequenceTokenEvent |
class |
SingleTokenDefinitionEvent
Event that indicates the definition of a single new valid token that could be contained in a sequence
of the current alignment.
|
class |
TokenSetDefinitionEvent
Event that indicates that a (predefined) definition of a character state set was found in the parsed file.
|
| Modifier and Type | Class and Description |
|---|---|
class |
LiteralMetadataEvent
Indicates that literal metadata is modeled at the current position of the document (event stream).
|
class |
ResourceMetadataEvent
Indicates that metadata linking a RDF resource has been encountered at the current position of the document.
|