Package | Description |
---|---|
info.bioinfweb.jphyloio.formats.nexus.blockhandlers |
Contains implementations of
NexusCommandEventReader
for commands that are valid in all Nexus blocks. |
Modifier and Type | Class and Description |
---|---|
class |
AbstractNexusBlockHandler
Abstract implementation of
NexusBlockHandler that stores a set of block names
in an unmodifiable collection. |
class |
CharactersDataUnalignedBlockHandler
A Nexus block handler to read sequence data from the
CHARACTERS , DATA or UNALIGNED
blocks. |
class |
ENewickNetworksBlockHandler
A Nexus block handler to read phylogenetic networks from a
NETWORK block containing network definitions
in the eNewick format. |
class |
TaxaBlockHandler |
class |
TreesBlockHandler |
Modifier and Type | Method and Description |
---|---|
NexusBlockHandler |
NexusBlockHandlerMap.getHandler(java.lang.String blockName)
Returns the handler that is registered for the specified block name.
|
Modifier and Type | Method and Description |
---|---|
void |
NexusBlockHandlerMap.addHandler(NexusBlockHandler handler)
Adds a new handler to this map.
|