info.bioinfweb.jphyloio.formats.xml.stax

Class MetaXMLStreamReader

java.lang.Object

info.bioinfweb.jphyloio.formats.xml.stax.AbstractMetaXMLReader

info.bioinfweb.jphyloio.formats.xml.stax.MetaXMLStreamReader

All Implemented Interfaces:

javax.xml.stream.XMLStreamConstants, javax.xml.stream.XMLStreamReader

public class MetaXMLStreamReader
extends AbstractMetaXMLReader
implements javax.xml.stream.XMLStreamReader

Adapter class that allows reading a sequence of LiteralMetadataContentEvents using an XMLStreamReader. Instances of this class should not (and cannot) be created directly in application code, but JPhyloIOXMLEventReader.createMetaXMLStreamReader() should be used instead.

Since it is registered which events are read from the event stream, it is possible to read only a part of the custom XML tree with this reader, while the rest is read using the original JPhyloIOEventReader.

Note that all methods intended to obtain information about the document start refer to the start of the whole document, not only the custom XML tree.

Methods of this reader referring to element text as a character array , e.g. getTextCharacters(), all work on a string representation obtained from a characters event. The usual performance benefits in using these character array based methods do not apply for this implementation, since it works on an underlying instance of JPhyloIOEventReader.

Author:

Sarah Wiechers, Ben Stöver

Field Summary

Fields inherited from interface javax.xml.stream.XMLStreamConstants

ATTRIBUTE, CDATA, CHARACTERS, COMMENT, DTD, END_DOCUMENT, END_ELEMENT, ENTITY_DECLARATION, ENTITY_REFERENCE, NAMESPACE, NOTATION_DECLARATION, PROCESSING_INSTRUCTION, SPACE, START_DOCUMENT, START_ELEMENT

Constructor Summary

Constructors

Constructor and Description
MetaXMLStreamReader(XMLReaderStreamDataProvider<?> streamDataProvider) Creates a new instance of this class.

Method Summary

Modifier and Type	Method and Description
int	getAttributeCount()
java.lang.String	getAttributeLocalName(int index)
javax.xml.namespace.QName	getAttributeName(int index)
java.lang.String	getAttributeNamespace(int index)
java.lang.String	getAttributePrefix(int index)
java.lang.String	getAttributeType(int index)
java.lang.String	getAttributeValue(int index)
java.lang.String	getAttributeValue(java.lang.String namespaceURI, java.lang.String localName)
java.lang.String	getCharacterEncodingScheme()
java.lang.String	getElementText()
java.lang.String	getEncoding()
int	getEventType()
java.lang.String	getLocalName()
javax.xml.stream.Location	getLocation()
javax.xml.namespace.QName	getName()
javax.xml.namespace.NamespaceContext	getNamespaceContext()
int	getNamespaceCount()
java.lang.String	getNamespacePrefix(int index)
java.lang.String	getNamespaceURI()
java.lang.String	getNamespaceURI(int index)
java.lang.String	getNamespaceURI(java.lang.String prefix)
java.lang.String	getPIData()
java.lang.String	getPITarget()
java.lang.String	getPrefix()
java.lang.String	getText()
char[]	getTextCharacters()
int	getTextCharacters(int sourceStart, char[] target, int targetStart, int length)
int	getTextLength()
int	getTextStart()
java.lang.String	getVersion()
boolean	hasName()
boolean	hasText()
boolean	isAttributeSpecified(int index)
boolean	isCharacters()
boolean	isEndElement()
boolean	isStandalone()
boolean	isStartElement()
boolean	isWhiteSpace()
int	next()
int	nextTag()
void	require(int type, java.lang.String namespaceURI, java.lang.String localName)
boolean	standaloneSet()

Methods inherited from class info.bioinfweb.jphyloio.formats.xml.stax.AbstractMetaXMLReader

close, getEventFactory, getJPhyloIOEventReader, getProperty, getStreamDataProvider, hasNext, isEndDocumentFired, isEndReached, isStartDocumentFired, obtainXMLContentEvent, setEndDocumentFired, setEndReached, setStartDocumentFired

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface javax.xml.stream.XMLStreamReader

close, getProperty, hasNext

Constructor Detail

MetaXMLStreamReader

public MetaXMLStreamReader(XMLReaderStreamDataProvider<?> streamDataProvider)

Creates a new instance of this class. Application code should not use this constructor directly, but use JPhyloIOXMLEventReader.createMetaXMLStreamReader() instead.

Parameters:

streamDataProvider - the stream data provider of the underlying JPhyloIOEventReader

Method Detail

getAttributeCount

public int getAttributeCount()

Specified by:

getAttributeCount in interface javax.xml.stream.XMLStreamReader

getAttributeLocalName

public java.lang.String getAttributeLocalName(int index)

Specified by:

getAttributeLocalName in interface javax.xml.stream.XMLStreamReader

getAttributeName

public javax.xml.namespace.QName getAttributeName(int index)

Specified by:

getAttributeName in interface javax.xml.stream.XMLStreamReader

getAttributeNamespace

public java.lang.String getAttributeNamespace(int index)

Specified by:

getAttributeNamespace in interface javax.xml.stream.XMLStreamReader

getAttributePrefix

public java.lang.String getAttributePrefix(int index)

Specified by:

getAttributePrefix in interface javax.xml.stream.XMLStreamReader

getAttributeType

public java.lang.String getAttributeType(int index)

Specified by:

getAttributeType in interface javax.xml.stream.XMLStreamReader

getAttributeValue

public java.lang.String getAttributeValue(int index)

Specified by:

getAttributeValue in interface javax.xml.stream.XMLStreamReader

getAttributeValue

public java.lang.String getAttributeValue(java.lang.String namespaceURI,
                                          java.lang.String localName)

Specified by:

getAttributeValue in interface javax.xml.stream.XMLStreamReader

getCharacterEncodingScheme

public java.lang.String getCharacterEncodingScheme()

Specified by:

getCharacterEncodingScheme in interface javax.xml.stream.XMLStreamReader

getElementText

public java.lang.String getElementText()
                                throws javax.xml.stream.XMLStreamException

Specified by:

getElementText in interface javax.xml.stream.XMLStreamReader

Throws:

javax.xml.stream.XMLStreamException

getEncoding

public java.lang.String getEncoding()

Specified by:

getEncoding in interface javax.xml.stream.XMLStreamReader

getEventType

public int getEventType()

Specified by:

getEventType in interface javax.xml.stream.XMLStreamReader

getLocalName

public java.lang.String getLocalName()

Specified by:

getLocalName in interface javax.xml.stream.XMLStreamReader

getLocation

public javax.xml.stream.Location getLocation()

Specified by:

getLocation in interface javax.xml.stream.XMLStreamReader

getName

public javax.xml.namespace.QName getName()

Specified by:

getName in interface javax.xml.stream.XMLStreamReader

getNamespaceContext

public javax.xml.namespace.NamespaceContext getNamespaceContext()

Specified by:

getNamespaceContext in interface javax.xml.stream.XMLStreamReader

getNamespaceCount

public int getNamespaceCount()

Specified by:

getNamespaceCount in interface javax.xml.stream.XMLStreamReader

getNamespacePrefix

public java.lang.String getNamespacePrefix(int index)

Specified by:

getNamespacePrefix in interface javax.xml.stream.XMLStreamReader

getNamespaceURI

public java.lang.String getNamespaceURI()

Specified by:

getNamespaceURI in interface javax.xml.stream.XMLStreamReader

getNamespaceURI

public java.lang.String getNamespaceURI(int index)

Specified by:

getNamespaceURI in interface javax.xml.stream.XMLStreamReader

getNamespaceURI

public java.lang.String getNamespaceURI(java.lang.String prefix)

Specified by:

getNamespaceURI in interface javax.xml.stream.XMLStreamReader

getPIData

public java.lang.String getPIData()

Specified by:

getPIData in interface javax.xml.stream.XMLStreamReader

getPITarget

public java.lang.String getPITarget()

Specified by:

getPITarget in interface javax.xml.stream.XMLStreamReader

getPrefix

public java.lang.String getPrefix()

Specified by:

getPrefix in interface javax.xml.stream.XMLStreamReader

getText

public java.lang.String getText()

Specified by:

getText in interface javax.xml.stream.XMLStreamReader

getTextCharacters

public char[] getTextCharacters()

Specified by:

getTextCharacters in interface javax.xml.stream.XMLStreamReader

getTextCharacters

public int getTextCharacters(int sourceStart,
                             char[] target,
                             int targetStart,
                             int length)
                      throws javax.xml.stream.XMLStreamException

Specified by:

getTextCharacters in interface javax.xml.stream.XMLStreamReader

Throws:

javax.xml.stream.XMLStreamException

getTextLength

public int getTextLength()

Specified by:

getTextLength in interface javax.xml.stream.XMLStreamReader

getTextStart

public int getTextStart()

Specified by:

getTextStart in interface javax.xml.stream.XMLStreamReader

getVersion

public java.lang.String getVersion()

Specified by:

getVersion in interface javax.xml.stream.XMLStreamReader

hasName

public boolean hasName()

Specified by:

hasName in interface javax.xml.stream.XMLStreamReader

hasText

public boolean hasText()

Specified by:

hasText in interface javax.xml.stream.XMLStreamReader

isAttributeSpecified

public boolean isAttributeSpecified(int index)

Specified by:

isAttributeSpecified in interface javax.xml.stream.XMLStreamReader

isCharacters

public boolean isCharacters()

Specified by:

isCharacters in interface javax.xml.stream.XMLStreamReader

isEndElement

public boolean isEndElement()

Specified by:

isEndElement in interface javax.xml.stream.XMLStreamReader

isStandalone

public boolean isStandalone()

Specified by:

isStandalone in interface javax.xml.stream.XMLStreamReader

isStartElement

public boolean isStartElement()

Specified by:

isStartElement in interface javax.xml.stream.XMLStreamReader

isWhiteSpace

public boolean isWhiteSpace()

Specified by:

isWhiteSpace in interface javax.xml.stream.XMLStreamReader

next

public int next()
         throws javax.xml.stream.XMLStreamException

Specified by:

next in interface javax.xml.stream.XMLStreamReader

Throws:

javax.xml.stream.XMLStreamException

nextTag

public int nextTag()
            throws javax.xml.stream.XMLStreamException

Specified by:

nextTag in interface javax.xml.stream.XMLStreamReader

Throws:

javax.xml.stream.XMLStreamException

require

public void require(int type,
                    java.lang.String namespaceURI,
                    java.lang.String localName)
             throws javax.xml.stream.XMLStreamException

Specified by:

require in interface javax.xml.stream.XMLStreamReader

Throws:

javax.xml.stream.XMLStreamException

standaloneSet

public boolean standaloneSet()

Specified by:

standaloneSet in interface javax.xml.stream.XMLStreamReader