| Package | Description |
|---|---|
| info.bioinfweb.libralign.alignmentarea |
Contains basic implementations for displaying an alignment area.
|
| info.bioinfweb.libralign.alignmentarea.content |
Contains classes related to
AlignmentContentArea which display
the contents of an alignment. |
| info.bioinfweb.libralign.alignmentarea.label |
Contains general classes implementing the labeling of sequences and data areas.
|
| info.bioinfweb.libralign.dataarea |
Contains
DataArea from which all data areas used in LibrAlign
must be inherited as well as related classes and a set of general data area implementations provided with
LibrAlign which are located in the subpackage implementations. |
| info.bioinfweb.libralign.dataarea.implementations |
Contains classes that implement a concrete data area.
|
| info.bioinfweb.libralign.dataarea.implementations.charset |
Contains data area related classes to display character sets of an alignment.
|
| info.bioinfweb.libralign.dataarea.implementations.pherogram |
Contains
PherogramArea and other classes used in its
implementation. |
| info.bioinfweb.libralign.dataarea.implementations.sequenceindex |
| Class and Description |
|---|
| AlignmentContentArea
Toolkit independent component displaying the contents (not the labels) of a single alignment and its attached
data areas.
|
| ToolkitSpecificAlignmentContentArea
Interface for all toolkit specific components displaying the contents of an alignment area (not including
the parent scroll container which is part of implementations of
ToolkitSpecificAlignmentArea). |
| Class and Description |
|---|
| AlignmentContentArea
Toolkit independent component displaying the contents (not the labels) of a single alignment and its attached
data areas.
|
| AlignmentPaintEvent
Event object used by
AlignmentSubArea that provides information on the area of a component
displaying a part of an alignment to be painted and the graphics context. |
| AlignmentSubArea
All GUI components that are part of an
AlignmentContentArea should inherit from this class. |
| AlignmentSubAreaInfo
Stores a reference to an
AlignmentSubArea and its y position relative to its parent
AlignmentContentArea. |
| AlignmentSubAreaIterator
Adapter class that converts an iterator of
ToolkitComponent to an iterator of AlignmentSubAreas. |
| SequenceArea
The area inside an
AlignmentArea that displays one sequence of the alignment. |
| SequenceAreaMap
Manages the
SequenceAreas that are contained in an implementation of
ToolkitSpecificMultipleAlignmentsContainer. |
| ToolkitSpecificAlignmentContentArea
Interface for all toolkit specific components displaying the contents of an alignment area (not including
the parent scroll container which is part of implementations of
ToolkitSpecificAlignmentArea). |
| Class and Description |
|---|
| AlignmentSubArea
All GUI components that are part of an
AlignmentContentArea should inherit from this class. |
| AlignmentSubAreaIterator
Adapter class that converts an iterator of
ToolkitComponent to an iterator of AlignmentSubAreas. |
| SequenceArea
The area inside an
AlignmentArea that displays one sequence of the alignment. |
| Class and Description |
|---|
| AlignmentContentArea
Toolkit independent component displaying the contents (not the labels) of a single alignment and its attached
data areas.
|
| AlignmentSubArea
All GUI components that are part of an
AlignmentContentArea should inherit from this class. |
| Class and Description |
|---|
| AlignmentContentArea
Toolkit independent component displaying the contents (not the labels) of a single alignment and its attached
data areas.
|
| AlignmentPaintEvent
Event object used by
AlignmentSubArea that provides information on the area of a component
displaying a part of an alignment to be painted and the graphics context. |
| AlignmentSubArea
All GUI components that are part of an
AlignmentContentArea should inherit from this class. |
| Class and Description |
|---|
| AlignmentContentArea
Toolkit independent component displaying the contents (not the labels) of a single alignment and its attached
data areas.
|
| AlignmentPaintEvent
Event object used by
AlignmentSubArea that provides information on the area of a component
displaying a part of an alignment to be painted and the graphics context. |
| AlignmentSubArea
All GUI components that are part of an
AlignmentContentArea should inherit from this class. |
| Class and Description |
|---|
| AlignmentContentArea
Toolkit independent component displaying the contents (not the labels) of a single alignment and its attached
data areas.
|
| AlignmentPaintEvent
Event object used by
AlignmentSubArea that provides information on the area of a component
displaying a part of an alignment to be painted and the graphics context. |
| AlignmentSubArea
All GUI components that are part of an
AlignmentContentArea should inherit from this class. |
| Class and Description |
|---|
| AlignmentContentArea
Toolkit independent component displaying the contents (not the labels) of a single alignment and its attached
data areas.
|
| AlignmentPaintEvent
Event object used by
AlignmentSubArea that provides information on the area of a component
displaying a part of an alignment to be painted and the graphics context. |
| AlignmentSubArea
All GUI components that are part of an
AlignmentContentArea should inherit from this class. |