info.bioinfweb.jphyloio.dataadapters

Interface TreeNetworkGroupDataAdapter

All Superinterfaces:

AnnotatedDataAdapter, ElementDataAdapter<LinkedLabeledIDEvent>

All Known Implementing Classes:

NoSetsTreeNetworkGroupDataAdapter, StoreTreeNetworkGroupDataAdapter

public interface TreeNetworkGroupDataAdapter
extends ElementDataAdapter<LinkedLabeledIDEvent>

Method Summary

Modifier and Type	Method and Description
java.util.Iterator<TreeNetworkDataAdapter>	getTreeNetworkIterator(ReadWriteParameterMap parameters) Returns an iterator providing access to all trees and networks contained in the document to be written.
ObjectListDataAdapter<LinkedLabeledIDEvent>	getTreeSets(ReadWriteParameterMap parameters) Returns a list of tree sets defined for the tree-network-group modeled by this instance.

Methods inherited from interface info.bioinfweb.jphyloio.dataadapters.ElementDataAdapter

getStartEvent

Methods inherited from interface info.bioinfweb.jphyloio.dataadapters.AnnotatedDataAdapter

writeMetadata

Method Detail

getTreeNetworkIterator

java.util.Iterator<TreeNetworkDataAdapter> getTreeNetworkIterator(ReadWriteParameterMap parameters)

Returns an iterator providing access to all trees and networks contained in the document to be written.

Parameters:

parameters - the parameter map of the calling writer that provides context information for the data request

Returns:

the iterator (Maybe empty but not null.)

getTreeSets

ObjectListDataAdapter<LinkedLabeledIDEvent> getTreeSets(ReadWriteParameterMap parameters)

Returns a list of tree sets defined for the tree-network-group modeled by this instance.

Parameters:

parameters - the parameter map of the calling writer that provides context information for the data request

Returns:

a (possibly empty) list of tree sets