Uses of Interface
info.bioinfweb.jphyloio.dataadapters.TreeNetworkGroupDataAdapter

Packages that use TreeNetworkGroupDataAdapter

Package	Description
info.bioinfweb.jphyloio.dataadapters	Contains adapter interfaces that should be implemented by adapters mediating between the business model of an application and implementations of JPhyloIOEventWriter.
info.bioinfweb.jphyloio.dataadapters.implementations	Contains some basic (abstract) implementations of JPhyloIOEventWriter.
info.bioinfweb.jphyloio.dataadapters.implementations.store	Contains implementations of data adapters that directly store their modeled data in mutable lists or maps instead of delegating to an application business model.

Uses of TreeNetworkGroupDataAdapter in info.bioinfweb.jphyloio.dataadapters

Methods in info.bioinfweb.jphyloio.dataadapters that return types with arguments of type TreeNetworkGroupDataAdapter

Modifier and Type	Method and Description
java.util.Iterator<TreeNetworkGroupDataAdapter>	DocumentDataAdapter.getTreeNetworkGroupIterator(ReadWriteParameterMap parameters) Returns an iterator providing access to all trees and network groups contained in the document to be written.

Uses of TreeNetworkGroupDataAdapter in info.bioinfweb.jphyloio.dataadapters.implementations

Classes in info.bioinfweb.jphyloio.dataadapters.implementations that implement TreeNetworkGroupDataAdapter

Modifier and Type	Class and Description
class	NoSetsTreeNetworkGroupDataAdapter Abstract implementation of TreeNetworkGroupDataAdapter, which returns an empty object list adapter for NoSetsTreeNetworkGroupDataAdapter.getTreeSets(ReadWriteParameterMap).

Methods in info.bioinfweb.jphyloio.dataadapters.implementations that return types with arguments of type TreeNetworkGroupDataAdapter

Modifier and Type	Method and Description
java.util.Iterator<TreeNetworkGroupDataAdapter>	EmptyDocumentDataAdapter.getTreeNetworkGroupIterator(ReadWriteParameterMap parameters)
java.util.Iterator<TreeNetworkGroupDataAdapter>	ListBasedDocumentDataAdapter.getTreeNetworkGroupIterator(ReadWriteParameterMap parameters)
java.util.List<TreeNetworkGroupDataAdapter>	ListBasedDocumentDataAdapter.getTreeNetworkGroups()

Constructor parameters in info.bioinfweb.jphyloio.dataadapters.implementations with type arguments of type TreeNetworkGroupDataAdapter

Constructor and Description
ListBasedDocumentDataAdapter(org.apache.commons.collections4.map.ListOrderedMap<java.lang.String,OTUListDataAdapter> otusMap, java.util.List<MatrixDataAdapter> matrices, java.util.List<TreeNetworkGroupDataAdapter> treeNetworkGroups) Creates a new instance of this class using the specified lists.

Uses of TreeNetworkGroupDataAdapter in info.bioinfweb.jphyloio.dataadapters.implementations.store

Classes in info.bioinfweb.jphyloio.dataadapters.implementations.store that implement TreeNetworkGroupDataAdapter

Modifier and Type	Class and Description
class	StoreTreeNetworkGroupDataAdapter

Methods in info.bioinfweb.jphyloio.dataadapters.implementations.store that return types with arguments of type TreeNetworkGroupDataAdapter

Modifier and Type	Method and Description
java.util.Iterator<TreeNetworkGroupDataAdapter>	StoreDocumentDataAdapter.getTreeNetworkGroupIterator(ReadWriteParameterMap parameters)
java.util.List<TreeNetworkGroupDataAdapter>	StoreDocumentDataAdapter.getTreesNetworks()

Constructor parameters in info.bioinfweb.jphyloio.dataadapters.implementations.store with type arguments of type TreeNetworkGroupDataAdapter

Constructor and Description
StoreDocumentDataAdapter(java.util.List<JPhyloIOEvent> annotations, org.apache.commons.collections4.OrderedMap<java.lang.String,OTUListDataAdapter> otusMap, java.util.List<MatrixDataAdapter> matrices, java.util.List<TreeNetworkGroupDataAdapter> treeNetworkGroups)