Uses of Interface
info.bioinfweb.jphyloio.dataadapters.AnnotatedDataAdapter

Packages that use AnnotatedDataAdapter

Package	Description
info.bioinfweb.jphyloio.dataadapters	Contains adapter interfaces that should be implemented by adapters mediating between the business model of an application and implementations of JPhyloIOEventWriter.
info.bioinfweb.jphyloio.dataadapters.implementations	Contains some basic (abstract) implementations of JPhyloIOEventWriter.
info.bioinfweb.jphyloio.dataadapters.implementations.store	Contains implementations of data adapters that directly store their modeled data in mutable lists or maps instead of delegating to an application business model.

Uses of AnnotatedDataAdapter in info.bioinfweb.jphyloio.dataadapters

Subinterfaces of AnnotatedDataAdapter in info.bioinfweb.jphyloio.dataadapters

Modifier and Type	Interface and Description
interface	DocumentDataAdapter The root adapter interface to be used with JPhyloIOEventWriters.
interface	ElementDataAdapter<E extends JPhyloIOEvent> Data adapters that model a data element identified by a certain start event should implement this interface.
interface	MatrixDataAdapter Adapter interface used to provide any type of character matrix data to instances of JPhyloIOEventWriter, including token and character set definitions related to this matrix.
interface	OTUListDataAdapter Allows to access data from the application business model that make up an OTU list.
interface	TreeNetworkDataAdapter Data adapter interface that provides data for a tree or a network.
interface	TreeNetworkGroupDataAdapter

Uses of AnnotatedDataAdapter in info.bioinfweb.jphyloio.dataadapters.implementations

Classes in info.bioinfweb.jphyloio.dataadapters.implementations that implement AnnotatedDataAdapter

Modifier and Type	Class and Description
class	EmptyAnnotatedDataAdapter<E extends JPhyloIOEvent> Default implementation of AnnotatedDataAdapter, which does not generate any metaevents.
class	EmptyDocumentDataAdapter An implementation of DocumentDataAdapter that models an empty document.
class	ListBasedDocumentDataAdapter Default implementation of DocumentDataAdapter.
class	NoCharDefsNoSetsMatrixDataAdapter Abstract implementation of MatrixDataAdapter, which returns empty object list adapters for NoCharDefsNoSetsMatrixDataAdapter.getCharacterDefinitions(ReadWriteParameterMap), NoCharDefsNoSetsMatrixDataAdapter.getTokenSets(ReadWriteParameterMap), NoCharDefsNoSetsMatrixDataAdapter.getSequenceSets(ReadWriteParameterMap), NoCharDefsNoSetsMatrixDataAdapter.getCharacterSets(ReadWriteParameterMap).
class	NoSetsTreeNetworkDataAdapter Abstract implementation of TreeNetworkDataAdapter, which returns an empty object list adapter for NoSetsTreeNetworkDataAdapter.getNodeEdgeSets(ReadWriteParameterMap).
class	NoSetsTreeNetworkGroupDataAdapter Abstract implementation of TreeNetworkGroupDataAdapter, which returns an empty object list adapter for NoSetsTreeNetworkGroupDataAdapter.getTreeSets(ReadWriteParameterMap).
class	UndefinedOTUListDataAdapter

Uses of AnnotatedDataAdapter in info.bioinfweb.jphyloio.dataadapters.implementations.store

Classes in info.bioinfweb.jphyloio.dataadapters.implementations.store that implement AnnotatedDataAdapter

Modifier and Type	Class and Description
class	StoreAnnotatedDataAdapter<E extends JPhyloIOEvent>
class	StoreDocumentDataAdapter
class	StoreMatrixDataAdapter
class	StoreOTUListDataAdapter
class	StoreTreeNetworkDataAdapter
class	StoreTreeNetworkGroupDataAdapter