Uses of Class
info.bioinfweb.jphyloio.dataadapters.implementations.receivers.BasicEventReceiver

Packages that use BasicEventReceiver

Package	Description
info.bioinfweb.jphyloio.dataadapters.implementations.receivers	Contains some basic (abstract) implementations of JPhyloIOEventReceiver to be used by implementations of JPhyloIOEventWriter.
info.bioinfweb.jphyloio.formats.newick	Contains classes for reading from and writing to streams/files in Newick tree format.
info.bioinfweb.jphyloio.formats.nexml.receivers	Contains implementations for JPhyloIOEventReceiver necessary for writing NeXML.
info.bioinfweb.jphyloio.formats.nexus.receivers	Contains implementations of JPhyloIOEventReceiver used internally by NexusEventReader.
info.bioinfweb.jphyloio.formats.phyloxml.receivers	Contains implementations for JPhyloIOEventReceiver necessary for writing PhyloXML.
info.bioinfweb.jphyloio.formats.text	Contains classes implementing shared functionality for reading from and writing to streams/files in text formats.
info.bioinfweb.jphyloio.formats.xml.receivers	Contains general (abstract) implementations for JPhyloIOEventReceiver necessary for writing XML formats.

Uses of BasicEventReceiver in info.bioinfweb.jphyloio.dataadapters.implementations.receivers

Subclasses of BasicEventReceiver in info.bioinfweb.jphyloio.dataadapters.implementations.receivers

Modifier and Type	Class and Description
class	AbstractSequenceContentReceiver<P extends WriterStreamDataProvider<? extends AbstractEventWriter<P>>>

Uses of BasicEventReceiver in info.bioinfweb.jphyloio.formats.newick

Subclasses of BasicEventReceiver in info.bioinfweb.jphyloio.formats.newick

Modifier and Type	Class and Description
class	NewickNodeEdgeEventReceiver<E extends JPhyloIOEvent>

Uses of BasicEventReceiver in info.bioinfweb.jphyloio.formats.nexml.receivers

Subclasses of BasicEventReceiver in info.bioinfweb.jphyloio.formats.nexml.receivers

Modifier and Type	Class and Description
class	AbstractNeXMLDataReceiver Implements basic functionality for event receivers writing NeXML.
class	NeXMLAttributeMetadataReceiver Receiver that is used to store the contents of metadata events with certain predicates in a map to be written as attribute/value pairs later on.
class	NeXMLCharacterSetEventReceiver Receiver that ensures no other events than character set intervals are contained in a character set.
class	NeXMLCollectCharSetDataReceiver Receiver that collects the IDs of character set elements.
class	NeXMLCollectNamespaceReceiver Receiver that collects namespace definitions occurring in document metadata by calling the according methods of the AbstractNeXMLDataReceiverMixin.
class	NeXMLCollectSequenceDataReceiver Receiver that collects information about the sequence tokens contained in a document.
class	NeXMLCollectSetMetadataReceiver Receiver that collects information about sets contained in a document.
class	NeXMLCollectTokenSetDefinitionDataReceiver Receiver that is used to check the contents of a token set.
class	NeXMLHandleSequenceDataReceiver General implementation of a receiver that processes sequence tokens.
class	NeXMLIgnoreCertainMetadataReceiver Receiver that is able to ignore metadata events with certain predicates, e.g.
class	NeXMLMetaDataReceiver This receiver should be used if no other elements than meta are expected under an element.
class	NeXMLMolecularDataTokenDefinitionReceiver Receiver that writes token definitions for molecular data, such as DNA, RNA or protein sequences.
class	NeXMLOnlyWriteMetaDataReceiver Receiver that writes meta data but ignores other events that were processed previously.
class	NeXMLPredicateMetaReceiver General implementation of a receiver that allows to process metadata events with certain predicates in a special way.
class	NeXMLSequenceTokensReceiver Receiver that is used to write sequence tokens.
class	NeXMLTokenSetEventReceiver Receiver that is used to write token sets.

Uses of BasicEventReceiver in info.bioinfweb.jphyloio.formats.nexus.receivers

Subclasses of BasicEventReceiver in info.bioinfweb.jphyloio.formats.nexus.receivers

Modifier and Type	Class and Description
class	AbstractNexusEventReceiver Implements basic functionality for event receivers writing Nexus.
class	AbstractNexusSetsEventReceiver General implementation for event receivers writing Nexus set commands.
class	CharacterSetEventReceiver
class	ReferenceOnlySetReceiver
class	TokenSetEventReceiver

Uses of BasicEventReceiver in info.bioinfweb.jphyloio.formats.phyloxml.receivers

Subclasses of BasicEventReceiver in info.bioinfweb.jphyloio.formats.phyloxml.receivers

Modifier and Type	Class and Description
class	PhyloXMLCollectMetadataDataReceiver Receiver that is used to collect information from meta events (e.g.
class	PhyloXMLMetaDataReceiver Receiver that implements a general strategy of writing metadata to a PhyloXML document.
class	PhyloXMLOnlyCustomXMLDataReceiver Receiver, that writes only custom XML, e.g nested under document.
class	PhyloXMLPropertyMetadataReceiver This receiver is used to write the contents of meta events to a document, if their predicates indicate that they contain information about a PhyloXML property tag.
class	PhyloXMLSpecificPredicatesDataReceiver Receiver that is used to translate between meta events with certain predicates indicating they contain information about a PhyloXML tag and the actual tag.

Uses of BasicEventReceiver in info.bioinfweb.jphyloio.formats.text

Subclasses of BasicEventReceiver in info.bioinfweb.jphyloio.formats.text

Modifier and Type	Class and Description
class	BasicTextCommentEventReceiver<P extends TextWriterStreamDataProvider<? extends AbstractTextEventWriter<P>>> Basic event receiver implementation that writes comments to text formats that are delimited by a start and an end string.
class	TextSequenceContentReceiver<P extends TextWriterStreamDataProvider<? extends AbstractTextEventWriter<P>>> Receiver that writes all encountered sequence tokens and comments to the current line and ignores all metadata.

Methods in info.bioinfweb.jphyloio.formats.text with parameters of type BasicEventReceiver

Modifier and Type	Method and Description
static void	BasicTextCommentEventReceiver.writeComment(BasicEventReceiver<?> receiver, CommentEvent event, java.lang.String commentStart, java.lang.String commentEnd)

Uses of BasicEventReceiver in info.bioinfweb.jphyloio.formats.xml.receivers

Subclasses of BasicEventReceiver in info.bioinfweb.jphyloio.formats.xml.receivers

Modifier and Type	Class and Description
class	AbstractXMLDataReceiver<P extends XMLWriterStreamDataProvider<? extends AbstractXMLEventWriter<P>>> Abstract implementation of a data receiver that can be used to write XML formats.