Package | Description |
---|---|
info.bioinfweb.jphyloio.dataadapters.implementations.receivers |
Contains some basic (abstract) implementations of
JPhyloIOEventReceiver
to be used by implementations of JPhyloIOEventWriter . |
info.bioinfweb.jphyloio.events |
Contains implementations of JPhyloIO events, triggered during event based parsing.
|
info.bioinfweb.jphyloio.formats.newick |
Contains classes for reading from and writing to streams/files in Newick tree format.
|
info.bioinfweb.jphyloio.formats.nexml.receivers |
Contains implementations for
JPhyloIOEventReceiver necessary for writing
NeXML. |
info.bioinfweb.jphyloio.formats.phyloxml.receivers |
Contains implementations for
JPhyloIOEventReceiver necessary for writing
PhyloXML. |
info.bioinfweb.jphyloio.formats.text |
Contains classes implementing shared functionality for reading from and writing to streams/files in text formats.
|
info.bioinfweb.jphyloio.formats.xml.receivers |
Contains general (abstract) implementations for
JPhyloIOEventReceiver necessary for
writing XML formats. |
Modifier and Type | Method and Description |
---|---|
protected void |
BasicEventReceiver.handleComment(CommentEvent event) |
Modifier and Type | Method and Description |
---|---|
CommentEvent |
ConcreteJPhyloIOEvent.asCommentEvent() |
CommentEvent |
JPhyloIOEvent.asCommentEvent()
Casts this event to a comment event.
|
Modifier and Type | Method and Description |
---|---|
protected void |
NewickNodeEdgeEventReceiver.handleComment(CommentEvent event) |
Modifier and Type | Method and Description |
---|---|
protected void |
NeXMLAttributeMetadataReceiver.handleComment(CommentEvent event) |
protected void |
NeXMLCollectNamespaceReceiver.handleComment(CommentEvent event) |
protected void |
NeXMLCollectSetMetadataReceiver.handleComment(CommentEvent event) |
protected void |
NeXMLIgnoreCertainMetadataReceiver.handleComment(CommentEvent event) |
protected void |
NeXMLMetaDataReceiver.handleComment(CommentEvent event) |
protected void |
NeXMLMolecularDataTokenDefinitionReceiver.handleComment(CommentEvent event) |
protected void |
NeXMLSequenceTokensReceiver.handleComment(CommentEvent event) |
static void |
AbstractNeXMLDataReceiverMixin.handleComment(NeXMLWriterStreamDataProvider streamDataProvider,
CommentEvent event) |
Modifier and Type | Method and Description |
---|---|
protected void |
PhyloXMLCollectMetadataDataReceiver.handleComment(CommentEvent event) |
Modifier and Type | Method and Description |
---|---|
protected void |
BasicTextCommentEventReceiver.handleComment(CommentEvent event) |
protected void |
TextSequenceContentReceiver.handleComment(CommentEvent event) |
static void |
BasicTextCommentEventReceiver.writeComment(BasicEventReceiver<?> receiver,
CommentEvent event,
java.lang.String commentStart,
java.lang.String commentEnd) |
Modifier and Type | Method and Description |
---|---|
protected void |
AbstractXMLDataReceiver.handleComment(CommentEvent event) |