Package | Description |
---|---|
info.bioinfweb.jphyloio.dataadapters.implementations.receivers |
Contains some basic (abstract) implementations of
JPhyloIOEventReceiver
to be used by implementations of JPhyloIOEventWriter . |
info.bioinfweb.jphyloio.events |
Contains implementations of JPhyloIO events, triggered during event based parsing.
|
info.bioinfweb.jphyloio.formats.newick |
Contains classes for reading from and writing to streams/files in Newick tree format.
|
info.bioinfweb.jphyloio.formats.nexml.receivers |
Contains implementations for
JPhyloIOEventReceiver necessary for writing
NeXML. |
info.bioinfweb.jphyloio.formats.phyloxml.receivers |
Contains implementations for
JPhyloIOEventReceiver necessary for writing
PhyloXML. |
info.bioinfweb.jphyloio.formats.xml |
Contains classes implementing shared functionality for reading from and writing to streams/files in XML formats.
|
Modifier and Type | Method and Description |
---|---|
protected void |
BasicEventReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
Modifier and Type | Method and Description |
---|---|
LiteralMetadataContentEvent |
ConcreteJPhyloIOEvent.asLiteralMetadataContentEvent() |
LiteralMetadataContentEvent |
JPhyloIOEvent.asLiteralMetadataContentEvent()
Casts this event to a literal content metadata event.
|
Modifier and Type | Method and Description |
---|---|
protected void |
NewickNodeEdgeEventReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
Modifier and Type | Method and Description |
---|---|
static void |
AbstractNeXMLDataReceiverMixin.checkLiteralContentMeta(NeXMLWriterStreamDataProvider streamDataProvider,
ReadWriteParameterMap parameters,
LiteralMetadataContentEvent event) |
protected void |
NeXMLAttributeMetadataReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
protected void |
NeXMLCollectNamespaceReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
protected void |
NeXMLCollectSequenceDataReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
protected void |
NeXMLCollectSetMetadataReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
protected void |
NeXMLIgnoreCertainMetadataReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
protected void |
NeXMLMetaDataReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
protected void |
NeXMLMolecularDataTokenDefinitionReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
protected void |
NeXMLSequenceTokensReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
static void |
AbstractNeXMLDataReceiverMixin.handleLiteralContentMeta(NeXMLWriterStreamDataProvider streamDataProvider,
ReadWriteParameterMap parameters,
LiteralMetadataContentEvent event) |
Modifier and Type | Method and Description |
---|---|
protected void |
PhyloXMLCollectMetadataDataReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
protected void |
PhyloXMLMetaDataReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
protected void |
PhyloXMLOnlyCustomXMLDataReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
protected void |
PhyloXMLPropertyMetadataReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
protected void |
PhyloXMLSpecificPredicatesDataReceiver.handleLiteralContentMeta(LiteralMetadataContentEvent event) |
protected java.lang.String |
PhyloXMLMetaDataReceiver.processLiteralContent(LiteralMetadataContentEvent event,
ObjectTranslator<?> translator,
javax.xml.namespace.QName datatype) |
Modifier and Type | Method and Description |
---|---|
static void |
XMLReadWriteUtils.manageLiteralContentMetaNamespaces(XMLWriterStreamDataProvider streamDataProvider,
ReadWriteParameterMap parameters,
LiteralMetadataContentEvent event)
This method manages namespaces used or declared in any custom XML events depending on the parameter
ReadWriteParameterNames.KEY_CUSTOM_XML_NAMESPACE_HANDLING . |