Uses of Interface
info.bioinfweb.jphyloio.formats.JPhyloIOFormatIDs

Packages that use JPhyloIOFormatIDs

Package	Description
info.bioinfweb.jphyloio.factory	Contains interfaces and general implementations for creating JPhyloIO readers and writers related to JPhyloIOReaderWriterFactory.
info.bioinfweb.jphyloio.formats.fasta	Contains classes for reading from and writing to streams/files in FASTA format.
info.bioinfweb.jphyloio.formats.mega	Contains classes for reading from and writing to streams/files in MEGA format.
info.bioinfweb.jphyloio.formats.newick	Contains classes for reading from and writing to streams/files in Newick tree format.
info.bioinfweb.jphyloio.formats.nexml	Contains classes for reading from and writing to streams/files in NeXML format.
info.bioinfweb.jphyloio.formats.nexus	Contains classes for reading from and writing to streams/files in Nexus format.
info.bioinfweb.jphyloio.formats.pde	Contains classes for reading from streams/files in PDE format.
info.bioinfweb.jphyloio.formats.phylip	Contains classes for reading from and writing to streams/files in Phylip format.
info.bioinfweb.jphyloio.formats.phyloxml	Contains classes for reading from and writing to streams/files in PhyloXML format.
info.bioinfweb.jphyloio.formats.xtg	Contains classes for reading from and writing to streams/files in XTG format.

Uses of JPhyloIOFormatIDs in info.bioinfweb.jphyloio.factory

Classes in info.bioinfweb.jphyloio.factory that implement JPhyloIOFormatIDs

Modifier and Type	Class and Description
class	JPhyloIOReaderWriterFactory Factory to create instances of JPhyloIO event readers and writers as well as JPhyloIOFormatInfo instances.

Uses of JPhyloIOFormatIDs in info.bioinfweb.jphyloio.formats.fasta

Classes in info.bioinfweb.jphyloio.formats.fasta that implement JPhyloIOFormatIDs

Modifier and Type	Class and Description
class	FASTAFactory Reader and writer factory for the FASTA format.

Uses of JPhyloIOFormatIDs in info.bioinfweb.jphyloio.formats.mega

Classes in info.bioinfweb.jphyloio.formats.mega that implement JPhyloIOFormatIDs

Modifier and Type	Class and Description
class	MEGAFactory Reader and writer factory for the MEGA format.

Uses of JPhyloIOFormatIDs in info.bioinfweb.jphyloio.formats.newick

Classes in info.bioinfweb.jphyloio.formats.newick that implement JPhyloIOFormatIDs

Modifier and Type	Class and Description
class	NewickFactory Reader and writer factory for the Newick format.

Uses of JPhyloIOFormatIDs in info.bioinfweb.jphyloio.formats.nexml

Classes in info.bioinfweb.jphyloio.formats.nexml that implement JPhyloIOFormatIDs

Modifier and Type	Class and Description
class	NeXMLFactory Reader and writer factory for the NeXML format.

Uses of JPhyloIOFormatIDs in info.bioinfweb.jphyloio.formats.nexus

Classes in info.bioinfweb.jphyloio.formats.nexus that implement JPhyloIOFormatIDs

Modifier and Type	Class and Description
class	NexusFactory Reader and writer factory for the Nexus format.

Uses of JPhyloIOFormatIDs in info.bioinfweb.jphyloio.formats.pde

Classes in info.bioinfweb.jphyloio.formats.pde that implement JPhyloIOFormatIDs

Modifier and Type	Class and Description
class	PDEFactory Reader and writer factory for the PDE format.

Uses of JPhyloIOFormatIDs in info.bioinfweb.jphyloio.formats.phylip

Classes in info.bioinfweb.jphyloio.formats.phylip that implement JPhyloIOFormatIDs

Modifier and Type	Class and Description
class	AbstractPhylipFactory Implements shared functionality for Phylip factories.
class	PhylipFactory Reader and writer factory for the (non-sequential) Phylip format.
class	SequentialPhylipFactory Reader and writer factory for the sequential Phylip format.

Uses of JPhyloIOFormatIDs in info.bioinfweb.jphyloio.formats.phyloxml

Classes in info.bioinfweb.jphyloio.formats.phyloxml that implement JPhyloIOFormatIDs

Modifier and Type	Class and Description
class	PhyloXMLFactory Reader and writer factory for the PhyloXML format.

Uses of JPhyloIOFormatIDs in info.bioinfweb.jphyloio.formats.xtg

Classes in info.bioinfweb.jphyloio.formats.xtg that implement JPhyloIOFormatIDs

Modifier and Type	Class and Description
class	XTGFactory Reader and writer factory for the XTG format.