Package | Description |
---|---|
info.bioinfweb.libralign.model.adapters |
Contains adapter classes that allow to access the data provided by
BasicAlignmentModelView in other ways
(e.g. |
info.bioinfweb.libralign.model.implementations.decorate |
Class and Description |
---|
AbstractBasicAlignmentModelView
All classes implementing
BasicAlignmentModelView s can inherit from this class,
which implements the access to the underlying data source. |
AbstractSingleSequenceDataAdapter
Implements basic functionality of
SingleSequenceDataAdapter . |
CharSequenceAdapter
Adapter class that allows to access the contents of an implementation of
AlignmentModel
as a set of CharSequence s or String s. |
InvalidUnderlyingTokenException
Exception that indicates that a token that could not be translated by a
SingleSequenceDataAdapter
was found. |
SequenceDataAdapter
Classes implementing this interface provide access to the data provided by an implementation of
AlignmentModel in a different way (e.g. |
SingleBioJava3SequenceAdapter
Abstract base class for all implementations of
SingleSequenceDataAdapter that allow
to view one sequence of a AlignmentModel as a BioJava Sequence object. |
SingleSequenceDataAdapter
Adapter classes providing views of (sub-) sequences of single rows of an implementation of
AlignmentModel should implement this interface. |
Class and Description |
---|
AbstractBasicAlignmentModelView
All classes implementing
BasicAlignmentModelView s can inherit from this class,
which implements the access to the underlying data source. |