| Package | Description |
|---|---|
| info.bioinfweb.libralign.model.adapters |
Contains adapter classes that allow to access the data provided by
BasicAlignmentModelView in other ways
(e.g. |
| info.bioinfweb.libralign.model.implementations.decorate |
| Class and Description |
|---|
| AbstractBasicAlignmentModelView
All classes implementing
BasicAlignmentModelViews can inherit from this class,
which implements the access to the underlying data source. |
| AbstractSingleSequenceDataAdapter
Implements basic functionality of
SingleSequenceDataAdapter. |
| CharSequenceAdapter
Adapter class that allows to access the contents of an implementation of
AlignmentModel
as a set of CharSequences or Strings. |
| InvalidUnderlyingTokenException
Exception that indicates that a token that could not be translated by a
SingleSequenceDataAdapter
was found. |
| SequenceDataAdapter
Classes implementing this interface provide access to the data provided by an implementation of
AlignmentModel in a different way (e.g. |
| SingleBioJava3SequenceAdapter
Abstract base class for all implementations of
SingleSequenceDataAdapter that allow
to view one sequence of a AlignmentModel as a BioJava Sequence object. |
| SingleSequenceDataAdapter
Adapter classes providing views of (sub-) sequences of single rows of an implementation of
AlignmentModel should implement this interface. |
| Class and Description |
|---|
| AbstractBasicAlignmentModelView
All classes implementing
BasicAlignmentModelViews can inherit from this class,
which implements the access to the underlying data source. |