Uses of Package
info.bioinfweb.jphyloio.formats.nexus.commandreaders

Packages that use info.bioinfweb.jphyloio.formats.nexus.commandreaders

Package	Description
info.bioinfweb.jphyloio.formats.nexus.blockhandlers	Contains implementations of NexusCommandEventReader for commands that are valid in all Nexus blocks.
info.bioinfweb.jphyloio.formats.nexus.commandreaders	Contains general classes for reading Nexus commands.
info.bioinfweb.jphyloio.formats.nexus.commandreaders.all	Contains implementations of NexusCommandEventReader for commands that are valid in all Nexus blocks.
info.bioinfweb.jphyloio.formats.nexus.commandreaders.characters	Contains classes for reading Nexus commands in a CHARACTERS, UNALIGNED or DATA block.
info.bioinfweb.jphyloio.formats.nexus.commandreaders.sets	Contains classes for reading Nexus commands in a SETS block.
info.bioinfweb.jphyloio.formats.nexus.commandreaders.taxa	Contains classes for reading Nexus commands in a TAXA block.
info.bioinfweb.jphyloio.formats.nexus.commandreaders.trees	Contains classes for reading Nexus commands in a TREES block.

Classes in info.bioinfweb.jphyloio.formats.nexus.commandreaders used by info.bioinfweb.jphyloio.formats.nexus.blockhandlers

Class and Description
NexusCommandEventReader Interface to be implement by all classes and parse a single Nexus command and convert its contents into JPhyloIO events.

Classes in info.bioinfweb.jphyloio.formats.nexus.commandreaders used by info.bioinfweb.jphyloio.formats.nexus.commandreaders

Class and Description
AbstractNexusCommandEventReader Implements shared functionality for classes implementing NexusCommandEventReader.
NexusCommandEventReader Interface to be implement by all classes and parse a single Nexus command and convert its contents into JPhyloIO events.
NexusCommandReaderFactory A factory class that creates instance of NexusCommandEventReader.

Classes in info.bioinfweb.jphyloio.formats.nexus.commandreaders used by info.bioinfweb.jphyloio.formats.nexus.commandreaders.all

Class and Description
AbstractKeyValueCommandReader
AbstractNexusCommandEventReader Implements shared functionality for classes implementing NexusCommandEventReader.
NexusCommandEventReader Interface to be implement by all classes and parse a single Nexus command and convert its contents into JPhyloIO events.

Classes in info.bioinfweb.jphyloio.formats.nexus.commandreaders used by info.bioinfweb.jphyloio.formats.nexus.commandreaders.characters

Class and Description
AbstractKeyValueCommandReader
AbstractNexusCommandEventReader Implements shared functionality for classes implementing NexusCommandEventReader.
NexusCommandEventReader Interface to be implement by all classes and parse a single Nexus command and convert its contents into JPhyloIO events.

Classes in info.bioinfweb.jphyloio.formats.nexus.commandreaders used by info.bioinfweb.jphyloio.formats.nexus.commandreaders.sets

Class and Description
AbstractNexusCommandEventReader Implements shared functionality for classes implementing NexusCommandEventReader.
NexusCommandEventReader Interface to be implement by all classes and parse a single Nexus command and convert its contents into JPhyloIO events.

Classes in info.bioinfweb.jphyloio.formats.nexus.commandreaders used by info.bioinfweb.jphyloio.formats.nexus.commandreaders.taxa

Class and Description
AbstractNexusCommandEventReader Implements shared functionality for classes implementing NexusCommandEventReader.
NexusCommandEventReader Interface to be implement by all classes and parse a single Nexus command and convert its contents into JPhyloIO events.

Classes in info.bioinfweb.jphyloio.formats.nexus.commandreaders used by info.bioinfweb.jphyloio.formats.nexus.commandreaders.trees

Class and Description
AbstractNexusCommandEventReader Implements shared functionality for classes implementing NexusCommandEventReader.
NexusCommandEventReader Interface to be implement by all classes and parse a single Nexus command and convert its contents into JPhyloIO events.