Uses of Package
info.bioinfweb.jphyloio.formats.phyloxml

Packages that use info.bioinfweb.jphyloio.formats.phyloxml

Package	Description
info.bioinfweb.jphyloio	The main package of JPhyloIO.
info.bioinfweb.jphyloio.formats.newick	Contains classes for reading from and writing to streams/files in Newick tree format.
info.bioinfweb.jphyloio.formats.phyloxml	Contains classes for reading from and writing to streams/files in PhyloXML format.
info.bioinfweb.jphyloio.formats.phyloxml.elementreader	Contains implementations of XMLElementReader used by PhyloXMLEventReader.
info.bioinfweb.jphyloio.formats.phyloxml.receivers	Contains implementations for JPhyloIOEventReceiver necessary for writing PhyloXML.

Classes in info.bioinfweb.jphyloio.formats.phyloxml used by info.bioinfweb.jphyloio

Class and Description
PhyloXMLMetadataTreatment Instances of this enum can be used as parameter values for ReadWriteParameterNames.KEY_PHYLOXML_METADATA_TREATMENT.

Classes in info.bioinfweb.jphyloio.formats.phyloxml used by info.bioinfweb.jphyloio.formats.newick

Class and Description
PhyloXMLConstants Defines constants necessary to read and write PhyloXML files.

Classes in info.bioinfweb.jphyloio.formats.phyloxml used by info.bioinfweb.jphyloio.formats.phyloxml

Class and Description
PhyloXMLConstants Defines constants necessary to read and write PhyloXML files.
PhyloXMLEventReader Event reader for the PhyloXML format.
PhyloXMLEventWriter Event writer for the PhyloXML format.
PhyloXMLMetadataTreatment Instances of this enum can be used as parameter values for ReadWriteParameterNames.KEY_PHYLOXML_METADATA_TREATMENT.
PhyloXMLMetaEventInfo Class that is used by PhyloXMLEventWriter to model a meta event in a hierarchical structure of metadata.
PhyloXMLPredicateInfo Class that is used as a value in PhyloXMLWriterStreamDataProvider.getPredicateInfoMap().
PhyloXMLPredicateTreatment This class enumerated ways to translate specific predicates to XML structures in a PhyloXML document.
PhyloXMLPrivateConstants This interface contains constants used internally in JPhyloIO by PhyloXMLEventWriter and PhyloXML data receivers.
PhyloXMLReaderStreamDataProvider The XMLReaderStreamDataProvider used by PhyloXMLEventReader.
PhyloXMLWriterStreamDataProvider The XMLWriterStreamDataProvider used by PhyloXMLEventWriter.
PropertyOwner This enum is used by PhyloXMLEventWriter to give data receivers information about the data element the contents of a meta event belong to.

Classes in info.bioinfweb.jphyloio.formats.phyloxml used by info.bioinfweb.jphyloio.formats.phyloxml.elementreader

Class and Description
PhyloXMLReaderStreamDataProvider The XMLReaderStreamDataProvider used by PhyloXMLEventReader.

Classes in info.bioinfweb.jphyloio.formats.phyloxml used by info.bioinfweb.jphyloio.formats.phyloxml.receivers

Class and Description
PhyloXMLConstants Defines constants necessary to read and write PhyloXML files.
PhyloXMLWriterStreamDataProvider The XMLWriterStreamDataProvider used by PhyloXMLEventWriter.
PropertyOwner This enum is used by PhyloXMLEventWriter to give data receivers information about the data element the contents of a meta event belong to.