| Package | Description |
|---|---|
| info.bioinfweb.jphyloio.formats.nexml |
Contains classes for reading from and writing to streams/files in NeXML format.
|
| info.bioinfweb.jphyloio.formats.pde |
Contains classes for reading from streams/files in PDE format.
|
| info.bioinfweb.jphyloio.formats.phyloxml |
Contains classes for reading from and writing to streams/files in PhyloXML format.
|
| info.bioinfweb.jphyloio.formats.xml |
Contains classes implementing shared functionality for reading from and writing to streams/files in XML formats.
|
| info.bioinfweb.jphyloio.formats.xml.elementreaders |
Contains general (abstract) implementations of
XMLElementReader used by
readers of XML formats. |
| info.bioinfweb.jphyloio.formats.xml.stax |
Contains implementations that allow StAX based reading and writing of XML metadata.
|
| info.bioinfweb.jphyloio.formats.xtg |
Contains classes for reading from and writing to streams/files in XTG format.
|
| Modifier and Type | Class and Description |
|---|---|
class |
NeXMLReaderStreamDataProvider
Stores data that shall be shared among different implementations of
AbstractNeXMLElementReader
reading from the same document. |
| Modifier and Type | Class and Description |
|---|---|
class |
PDEReaderStreamDataProvider
The XML stream data provider used by
PDEEventReader. |
| Modifier and Type | Class and Description |
|---|---|
class |
PhyloXMLReaderStreamDataProvider
The
XMLReaderStreamDataProvider used by PhyloXMLEventReader. |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractXMLEventReader<P extends XMLReaderStreamDataProvider<? extends AbstractXMLEventReader<P>>>
Implements shared functionality for reading XML formats.
|
class |
XMLReaderStreamDataProvider<R extends AbstractXMLEventReader<? extends XMLReaderStreamDataProvider<R>>>
Stores data that shall be shared among different implementations of
XMLElementReader
reading from the same document. |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractXMLElementReader<P extends XMLReaderStreamDataProvider<? extends AbstractXMLEventReader<P>>>
Abstract implementation of an element reader that is used to process parts of an XML document.
|
class |
CommentElementReader<P extends XMLReaderStreamDataProvider<? extends AbstractXMLEventReader<P>>>
Element reader that is commonly used by
JPhyloIOXMLEventReaders to process comments. |
class |
StartDocumentElementReader<P extends XMLReaderStreamDataProvider<? extends AbstractXMLEventReader<P>>>
This element reader implements basic functionality for reading the start document event of an XML document.
|
interface |
XMLElementReader<P extends XMLReaderStreamDataProvider<? extends AbstractXMLEventReader<P>>>
This interface should be implemented by all element readers used to process XML formats.
|
| Modifier and Type | Method and Description |
|---|---|
void |
XMLEndElementReader.readEvent(XMLReaderStreamDataProvider streamDataProvider,
javax.xml.stream.events.XMLEvent event) |
void |
XMLNoCharactersAllowedElementReader.readEvent(XMLReaderStreamDataProvider streamDataProvider,
javax.xml.stream.events.XMLEvent event) |
void |
XMLStartElementReader.readEvent(XMLReaderStreamDataProvider streamDataProvider,
javax.xml.stream.events.XMLEvent event) |
| Modifier and Type | Method and Description |
|---|---|
protected XMLReaderStreamDataProvider<?> |
AbstractMetaXMLReader.getStreamDataProvider() |
| Constructor and Description |
|---|
AbstractMetaXMLReader(XMLReaderStreamDataProvider<?> streamDataProvider) |
MetaXMLEventReader(XMLReaderStreamDataProvider<?> streamDataProvider)
Creates a new instance of this class.
|
MetaXMLStreamReader(XMLReaderStreamDataProvider<?> streamDataProvider)
Creates a new instance of this class.
|
| Modifier and Type | Method and Description |
|---|---|
void |
XTGFormattedTextElementReader.readEvent(XMLReaderStreamDataProvider streamDataProvider,
javax.xml.stream.events.XMLEvent event) |