| Package | Description |
|---|---|
| info.bioinfweb.jphyloio.formats.nexml |
Contains classes for reading from and writing to streams/files in NeXML format.
|
| info.bioinfweb.jphyloio.formats.pde |
Contains classes for reading from streams/files in PDE format.
|
| info.bioinfweb.jphyloio.formats.phyloxml |
Contains classes for reading from and writing to streams/files in PhyloXML format.
|
| info.bioinfweb.jphyloio.formats.xml |
Contains classes implementing shared functionality for reading from and writing to streams/files in XML formats.
|
| info.bioinfweb.jphyloio.formats.xml.elementreaders |
Contains general (abstract) implementations of
XMLElementReader used by
readers of XML formats. |
| info.bioinfweb.jphyloio.formats.xml.receivers |
Contains general (abstract) implementations for
JPhyloIOEventReceiver necessary for
writing XML formats. |
| info.bioinfweb.jphyloio.formats.xml.stax |
Contains implementations that allow StAX based reading and writing of XML metadata.
|
| info.bioinfweb.jphyloio.formats.xtg |
Contains classes for reading from and writing to streams/files in XTG format.
|
| Class and Description |
|---|
| AbstractXMLEventReader
Implements shared functionality for reading XML formats.
|
| AbstractXMLEventWriter
Implements shared functionality for writing XML formats.
|
| AbstractXMLFactory
Implements shared functionality for reader and writer factories of XML formats.
|
| JPhyloIOXMLEventReader
Interface providing basic functionality for all JPhyloIO readers of XML formats.
|
| JPhyloIOXMLEventWriter
Interface providing basic functionality for all JPhyloIO writers of XML formats.
|
| XMLReaderStreamDataProvider
Stores data that shall be shared among different implementations of
XMLElementReader
reading from the same document. |
| XMLWriterStreamDataProvider
Stores data that shall be shared among different implementations of
AbstractXMLDataReceiver
and the according writer that uses them. |
| Class and Description |
|---|
| AbstractXMLEventReader
Implements shared functionality for reading XML formats.
|
| AbstractXMLFactory
Implements shared functionality for reader and writer factories of XML formats.
|
| JPhyloIOXMLEventReader
Interface providing basic functionality for all JPhyloIO readers of XML formats.
|
| XMLReaderStreamDataProvider
Stores data that shall be shared among different implementations of
XMLElementReader
reading from the same document. |
| Class and Description |
|---|
| AbstractXMLEventReader
Implements shared functionality for reading XML formats.
|
| AbstractXMLEventWriter
Implements shared functionality for writing XML formats.
|
| AbstractXMLFactory
Implements shared functionality for reader and writer factories of XML formats.
|
| JPhyloIOXMLEventReader
Interface providing basic functionality for all JPhyloIO readers of XML formats.
|
| JPhyloIOXMLEventWriter
Interface providing basic functionality for all JPhyloIO writers of XML formats.
|
| XMLReaderStreamDataProvider
Stores data that shall be shared among different implementations of
XMLElementReader
reading from the same document. |
| XMLWriterStreamDataProvider
Stores data that shall be shared among different implementations of
AbstractXMLDataReceiver
and the according writer that uses them. |
| Class and Description |
|---|
| AbstractXMLEventReader
Implements shared functionality for reading XML formats.
|
| AbstractXMLEventWriter
Implements shared functionality for writing XML formats.
|
| JPhyloIOXMLEventReader
Interface providing basic functionality for all JPhyloIO readers of XML formats.
|
| JPhyloIOXMLEventWriter
Interface providing basic functionality for all JPhyloIO writers of XML formats.
|
| XMLReaderStreamDataProvider
Stores data that shall be shared among different implementations of
XMLElementReader
reading from the same document. |
| XMLWriterStreamDataProvider
Stores data that shall be shared among different implementations of
AbstractXMLDataReceiver
and the according writer that uses them. |
| Class and Description |
|---|
| AbstractXMLEventReader
Implements shared functionality for reading XML formats.
|
| AttributeInfo
This class models an XML attribute.
|
| XMLReaderStreamDataProvider
Stores data that shall be shared among different implementations of
XMLElementReader
reading from the same document. |
| Class and Description |
|---|
| AbstractXMLEventWriter
Implements shared functionality for writing XML formats.
|
| XMLWriterStreamDataProvider
Stores data that shall be shared among different implementations of
AbstractXMLDataReceiver
and the according writer that uses them. |
| Class and Description |
|---|
| JPhyloIOXMLEventReader
Interface providing basic functionality for all JPhyloIO readers of XML formats.
|
| XMLReaderStreamDataProvider
Stores data that shall be shared among different implementations of
XMLElementReader
reading from the same document. |
| Class and Description |
|---|
| AbstractXMLEventReader
Implements shared functionality for reading XML formats.
|
| AbstractXMLFactory
Implements shared functionality for reader and writer factories of XML formats.
|
| AttributeInfo
This class models an XML attribute.
|
| JPhyloIOXMLEventReader
Interface providing basic functionality for all JPhyloIO readers of XML formats.
|
| XMLReaderStreamDataProvider
Stores data that shall be shared among different implementations of
XMLElementReader
reading from the same document. |