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ObjectListDataAdapter<E extends JPhyloIOEvent> - Interface in info.bioinfweb.jphyloio.dataadapters

Allows to provide data for a list of phylogenetic objects.

ObjectTranslator<O> - Interface in info.bioinfweb.jphyloio.objecttranslation

Classes implementing this interface are able to convert between Java Objects and their text or XML representation.

ObjectTranslatorFactory - Class in info.bioinfweb.jphyloio.objecttranslation

Factory to create instances of ObjectTranslator to be used with readers and writers of JPhyloIO to read and write literal metadata objects.

ObjectTranslatorFactory() - Constructor for class info.bioinfweb.jphyloio.objecttranslation.ObjectTranslatorFactory

obtainXMLContentEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.xml.stax.AbstractMetaXMLReader

ORIENT_DOWN - Static variable in interface info.bioinfweb.jphyloio.formats.xtg.XTGConstants

ORIENT_HORIZONTAL - Static variable in interface info.bioinfweb.jphyloio.formats.xtg.XTGConstants

ORIENT_UP - Static variable in interface info.bioinfweb.jphyloio.formats.xtg.XTGConstants

OTUListDataAdapter - Interface in info.bioinfweb.jphyloio.dataadapters

Allows to access data from the application business model that make up an OTU list.

OTUorOTUsEventInformation() - Constructor for class info.bioinfweb.jphyloio.formats.nexml.elementreader.AbstractNeXMLElementReader.OTUorOTUsEventInformation

otuOrOtusID - Variable in class info.bioinfweb.jphyloio.formats.nexml.elementreader.AbstractNeXMLElementReader.OTUorOTUsEventInformation

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