- handleBegin(NexusReaderStreamDataProvider) - Method in class info.bioinfweb.jphyloio.formats.nexus.blockhandlers.CharactersDataUnalignedBlockHandler
-
- handleBegin(NexusReaderStreamDataProvider) - Method in interface info.bioinfweb.jphyloio.formats.nexus.blockhandlers.NexusBlockHandler
-
- handleBegin(NexusReaderStreamDataProvider) - Method in class info.bioinfweb.jphyloio.formats.nexus.blockhandlers.TaxaBlockHandler
-
- handleBegin(NexusReaderStreamDataProvider) - Method in class info.bioinfweb.jphyloio.formats.nexus.blockhandlers.TreesBlockHandler
-
- handleCharacterSetInterval(CharacterSetIntervalEvent) - Method in class info.bioinfweb.jphyloio.formats.nexus.receivers.AbstractNexusSetsEventReceiver
-
- handleCharacterSetInterval(CharacterSetIntervalEvent) - Method in class info.bioinfweb.jphyloio.formats.nexus.receivers.CharacterSetEventReceiver
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.dataadapters.implementations.receivers.BasicEventReceiver
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.formats.newick.NewickNodeEdgeEventReceiver
-
- handleComment(NeXMLWriterStreamDataProvider, CommentEvent) - Static method in class info.bioinfweb.jphyloio.formats.nexml.receivers.AbstractNeXMLDataReceiverMixin
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLAttributeMetadataReceiver
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectNamespaceReceiver
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectSetMetadataReceiver
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLIgnoreCertainMetadataReceiver
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLMetaDataReceiver
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLMolecularDataTokenDefinitionReceiver
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLSequenceTokensReceiver
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLCollectMetadataDataReceiver
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.formats.text.BasicTextCommentEventReceiver
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.formats.text.TextSequenceContentReceiver
-
- handleComment(CommentEvent) - Method in class info.bioinfweb.jphyloio.formats.xml.receivers.AbstractXMLDataReceiver
-
- handleEnd(NexusReaderStreamDataProvider) - Method in class info.bioinfweb.jphyloio.formats.nexus.blockhandlers.CharactersDataUnalignedBlockHandler
-
- handleEnd(NexusReaderStreamDataProvider) - Method in interface info.bioinfweb.jphyloio.formats.nexus.blockhandlers.NexusBlockHandler
-
- handleEnd(NexusReaderStreamDataProvider) - Method in class info.bioinfweb.jphyloio.formats.nexus.blockhandlers.TaxaBlockHandler
-
- handleEnd(NexusReaderStreamDataProvider) - Method in class info.bioinfweb.jphyloio.formats.nexus.blockhandlers.TreesBlockHandler
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.dataadapters.implementations.receivers.BasicEventReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.newick.NewickNodeEdgeEventReceiver
-
- handleLiteralContentMeta(NeXMLWriterStreamDataProvider, ReadWriteParameterMap, LiteralMetadataContentEvent) - Static method in class info.bioinfweb.jphyloio.formats.nexml.receivers.AbstractNeXMLDataReceiverMixin
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLAttributeMetadataReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectNamespaceReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectSequenceDataReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectSetMetadataReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLIgnoreCertainMetadataReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLMetaDataReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLMolecularDataTokenDefinitionReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLSequenceTokensReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLCollectMetadataDataReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLMetaDataReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLOnlyCustomXMLDataReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLPropertyMetadataReceiver
-
- handleLiteralContentMeta(LiteralMetadataContentEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLSpecificPredicatesDataReceiver
-
- handleLiteralMeta(NeXMLWriterStreamDataProvider, LiteralMetadataEvent) - Static method in class info.bioinfweb.jphyloio.formats.nexml.receivers.AbstractNeXMLDataReceiverMixin
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.dataadapters.implementations.receivers.BasicEventReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.newick.NewickNodeEdgeEventReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLAttributeMetadataReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectNamespaceReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectSequenceDataReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectSetMetadataReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLIgnoreCertainMetadataReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLMetaDataReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLMolecularDataTokenDefinitionReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLSequenceTokensReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLCollectMetadataDataReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLMetaDataReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLPropertyMetadataReceiver
-
- handleLiteralMetaStart(LiteralMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLSpecificPredicatesDataReceiver
-
In this method LiteralMetadataEvents are processed.
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.dataadapters.implementations.receivers.BasicEventReceiver
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.newick.NewickNodeEdgeEventReceiver
-
- handleMetaEndEvent(NeXMLWriterStreamDataProvider, JPhyloIOEvent) - Static method in class info.bioinfweb.jphyloio.formats.nexml.receivers.AbstractNeXMLDataReceiverMixin
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLAttributeMetadataReceiver
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectNamespaceReceiver
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectSetMetadataReceiver
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLIgnoreCertainMetadataReceiver
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLMetaDataReceiver
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLMolecularDataTokenDefinitionReceiver
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLSequenceTokensReceiver
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLCollectMetadataDataReceiver
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLMetaDataReceiver
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLOnlyCustomXMLDataReceiver
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLPropertyMetadataReceiver
-
- handleMetaEndEvent(JPhyloIOEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLSpecificPredicatesDataReceiver
-
- handleResourceMeta(NeXMLWriterStreamDataProvider, ResourceMetadataEvent) - Static method in class info.bioinfweb.jphyloio.formats.nexml.receivers.AbstractNeXMLDataReceiverMixin
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.dataadapters.implementations.receivers.BasicEventReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLAttributeMetadataReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectNamespaceReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectSequenceDataReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectSetMetadataReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLIgnoreCertainMetadataReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLMetaDataReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLMolecularDataTokenDefinitionReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLSequenceTokensReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLCollectMetadataDataReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLMetaDataReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLOnlyCustomXMLDataReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLPropertyMetadataReceiver
-
- handleResourceMetaStart(ResourceMetadataEvent) - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLSpecificPredicatesDataReceiver
-
- handleSetElement(SetElementEvent) - Method in class info.bioinfweb.jphyloio.formats.nexus.receivers.AbstractNexusSetsEventReceiver
-
This method is called every time a
SetElementEvent
is encountered on the top level by
this receiver and must be implemented by inherited classes.
- handleSetElement(SetElementEvent) - Method in class info.bioinfweb.jphyloio.formats.nexus.receivers.CharacterSetEventReceiver
-
- handleSetElement(SetElementEvent) - Method in class info.bioinfweb.jphyloio.formats.nexus.receivers.ReferenceOnlySetReceiver
-
- handleToken(String, String) - Method in class info.bioinfweb.jphyloio.dataadapters.implementations.receivers.AbstractSequenceContentReceiver
-
- handleToken(String, String) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLCollectSequenceDataReceiver
-
- handleToken(String, String) - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLSequenceTokensReceiver
-
- handleToken(String, String) - Method in class info.bioinfweb.jphyloio.formats.text.TextSequenceContentReceiver
-
Creates a new instance of this class.
- handleTokenEnd() - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLHandleSequenceDataReceiver
-
- handleTokenEnd() - Method in class info.bioinfweb.jphyloio.formats.nexml.receivers.NeXMLSequenceTokensReceiver
-
- hasAlternativeStringValue() - Method in class info.bioinfweb.jphyloio.events.meta.LiteralMetadataEvent
-
Determines whether an alternative string representation is available for the value modeled by the following
sequence of
LiteralMetadataContentEvent
s.
- hasConstituents() - Method in class info.bioinfweb.jphyloio.events.SingleTokenDefinitionEvent
-
Returns true if a collection of constituents is specified for this token or false if it is not.
- hasDefaultBlockID(String) - Method in class info.bioinfweb.jphyloio.formats.nexus.commandreaders.all.BlockTitleToIDMap
-
- hasHandler(String) - Method in class info.bioinfweb.jphyloio.formats.nexus.blockhandlers.NexusBlockHandlerMap
-
Checks whether a handler for the specified block name is contained in this map.
- hashCode() - Method in class info.bioinfweb.jphyloio.events.meta.URIOrStringIdentifier
-
- hashCode() - Method in class info.bioinfweb.jphyloio.events.type.EventType
-
- hashCode() - Method in class info.bioinfweb.jphyloio.formats.xml.elementreaders.XMLElementReaderKey
-
- hashCode() - Method in class info.bioinfweb.jphyloio.objecttranslation.implementations.AbstractObjectTranslator
-
- hasIncompleteToken() - Method in class info.bioinfweb.jphyloio.formats.xml.XMLReaderStreamDataProvider
-
- hasLabel() - Method in class info.bioinfweb.jphyloio.events.LabeledEvent
-
Indicates whether the modeled data element carries a label.
- hasLength() - Method in class info.bioinfweb.jphyloio.events.EdgeEvent
-
Indicates whether this edge has a defined length.
- hasLink() - Method in interface info.bioinfweb.jphyloio.events.LinkedIDEvent
-
Indicates whether this event links another data element.
- hasLink() - Method in class info.bioinfweb.jphyloio.events.LinkedLabeledIDEvent
-
Indicates whether this event links another data element.
- hasLink() - Method in class info.bioinfweb.jphyloio.events.SetElementEvent
-
- hasMetadata() - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLCollectMetadataDataReceiver
-
- hasMetadataToWrite() - Method in class info.bioinfweb.jphyloio.formats.newick.NewickNodeEdgeEventReceiver
-
Determines whether this receiver currently stores metadata to be written into a Newick/Nexus hot comment.
- hasMoreTokens() - Method in class info.bioinfweb.jphyloio.formats.newick.NewickScanner
-
- hasName() - Method in class info.bioinfweb.jphyloio.formats.xml.stax.MetaXMLStreamReader
-
- hasNext() - Method in class info.bioinfweb.jphyloio.formats.xml.stax.AbstractMetaXMLReader
-
- hasNextEvent() - Method in class info.bioinfweb.jphyloio.AbstractEventReader
-
- hasNextEvent() - Method in interface info.bioinfweb.jphyloio.JPhyloIOEventReader
-
Checks if another event could be parsed from the underlying document.
- hasObjectValue() - Method in class info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent
-
Determines whether this instance carries a Java object of the metadata element it models.
- hasOTUList() - Method in class info.bioinfweb.jphyloio.formats.nexml.NeXMLWriterStreamDataProvider
-
- hasReader() - Method in interface info.bioinfweb.jphyloio.factory.SingleReaderWriterFactory
-
Determines whether this factory is able to create reader instances for its target format.
- hasReader() - Method in class info.bioinfweb.jphyloio.formats.fasta.FASTAFactory
-
- hasReader() - Method in class info.bioinfweb.jphyloio.formats.mega.MEGAFactory
-
- hasReader() - Method in class info.bioinfweb.jphyloio.formats.newick.NewickFactory
-
- hasReader() - Method in class info.bioinfweb.jphyloio.formats.nexml.NeXMLFactory
-
- hasReader() - Method in class info.bioinfweb.jphyloio.formats.nexus.NexusFactory
-
- hasReader() - Method in class info.bioinfweb.jphyloio.formats.pde.PDEFactory
-
- hasReader() - Method in class info.bioinfweb.jphyloio.formats.phylip.AbstractPhylipFactory
-
- hasReader() - Method in class info.bioinfweb.jphyloio.formats.phyloxml.PhyloXMLFactory
-
- hasReader() - Method in class info.bioinfweb.jphyloio.formats.xtg.XTGFactory
-
- hasSimpleContent() - Method in class info.bioinfweb.jphyloio.formats.phyloxml.receivers.PhyloXMLMetaDataReceiver
-
- hasSource() - Method in class info.bioinfweb.jphyloio.events.EdgeEvent
-
Indicates whether this edge has a source node and can therefore be considered a root edge.
- hasSpecialEventCollection() - Method in class info.bioinfweb.jphyloio.AbstractEventReader
-
Determines whether the current event collection is different from the queue of upcoming events.
- hasSpecialEventCollection() - Method in class info.bioinfweb.jphyloio.ReaderStreamDataProvider
-
Determines whether the current event collection is different from the queue of upcoming events.
- hasStringRepresentation() - Method in class info.bioinfweb.jphyloio.formats.phyloxml.PhyloXMLColorTranslator
-
- hasStringRepresentation() - Method in class info.bioinfweb.jphyloio.objecttranslation.implementations.AbstractXMLObjectTranslator
-
- hasStringRepresentation() - Method in class info.bioinfweb.jphyloio.objecttranslation.implementations.SimpleValueTranslator
-
- hasStringRepresentation() - Method in interface info.bioinfweb.jphyloio.objecttranslation.ObjectTranslator
-
Determines whether the objects handled by this instance have a simple string representation or need a more complex
XML representation.
- hasStringValue() - Method in class info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent
-
Determines whether this instance carries a string representation of the metadata element it models.
- hasText() - Method in class info.bioinfweb.jphyloio.formats.xml.stax.MetaXMLStreamReader
-
- hasTokenDefinitionSet() - Method in class info.bioinfweb.jphyloio.formats.nexml.NeXMLWriterAlignmentInformation
-
- hasTreeGroupMetadata() - Method in class info.bioinfweb.jphyloio.formats.phyloxml.PhyloXMLWriterStreamDataProvider
-
- hasWriter() - Method in interface info.bioinfweb.jphyloio.factory.SingleReaderWriterFactory
-
Determines whether this factory is able to create writer instances for its target format.
- hasWriter() - Method in class info.bioinfweb.jphyloio.formats.fasta.FASTAFactory
-
- hasWriter() - Method in class info.bioinfweb.jphyloio.formats.mega.MEGAFactory
-
- hasWriter() - Method in class info.bioinfweb.jphyloio.formats.newick.NewickFactory
-
- hasWriter() - Method in class info.bioinfweb.jphyloio.formats.nexml.NeXMLFactory
-
- hasWriter() - Method in class info.bioinfweb.jphyloio.formats.nexus.NexusFactory
-
- hasWriter() - Method in class info.bioinfweb.jphyloio.formats.pde.PDEFactory
-
- hasWriter() - Method in class info.bioinfweb.jphyloio.formats.phylip.AbstractPhylipFactory
-
- hasWriter() - Method in class info.bioinfweb.jphyloio.formats.phyloxml.PhyloXMLFactory
-
- hasWriter() - Method in class info.bioinfweb.jphyloio.formats.xtg.XTGFactory
-
- hasXMLEventValue() - Method in class info.bioinfweb.jphyloio.events.meta.LiteralMetadataContentEvent
-
Determines whether this instance carries an XMLEvent
as its object value.
- HexadecimalColorTranslator - Class in info.bioinfweb.jphyloio.objecttranslation.implementations
-
Converts between instances of Color
and their hexadecimal representation (e.g.
- HexadecimalColorTranslator() - Constructor for class info.bioinfweb.jphyloio.objecttranslation.implementations.HexadecimalColorTranslator
-
- HexBinaryTranslator - Class in info.bioinfweb.jphyloio.objecttranslation.implementations
-
- HexBinaryTranslator() - Constructor for class info.bioinfweb.jphyloio.objecttranslation.implementations.HexBinaryTranslator
-
- HOT_COMMENT_START_SYMBOL - Static variable in interface info.bioinfweb.jphyloio.formats.newick.NewickConstants
-
- HotCommentDataReader - Class in info.bioinfweb.jphyloio.formats.newick
-
Reads meta information from a hot comment in a Newick string like it is generated by MrBayes or BEAST.
- HotCommentDataReader() - Constructor for class info.bioinfweb.jphyloio.formats.newick.HotCommentDataReader
-