| Package | Description |
|---|---|
| info.bioinfweb.jphyloio.dataadapters.implementations.receivers |
Contains some basic (abstract) implementations of
JPhyloIOEventReceiver
to be used by implementations of JPhyloIOEventWriter. |
| info.bioinfweb.jphyloio.events |
Contains implementations of JPhyloIO events, triggered during event based parsing.
|
| info.bioinfweb.jphyloio.events.meta |
Contains event classes that model metadata, as well as related implementations.
|
| info.bioinfweb.jphyloio.formatinfo |
Contains
JPhyloIOFormatInfo and related classes that describe a format supported by JPhyloIO. |
| info.bioinfweb.jphyloio.formats.newick |
Contains classes for reading from and writing to streams/files in Newick tree format.
|
| info.bioinfweb.jphyloio.formats.nexml |
Contains classes for reading from and writing to streams/files in NeXML format.
|
| info.bioinfweb.jphyloio.formats.nexml.receivers |
Contains implementations for
JPhyloIOEventReceiver necessary for writing
NeXML. |
| info.bioinfweb.jphyloio.formats.phyloxml.receivers |
Contains implementations for
JPhyloIOEventReceiver necessary for writing
PhyloXML. |
| info.bioinfweb.jphyloio.formats.xml |
Contains classes implementing shared functionality for reading from and writing to streams/files in XML formats.
|
| info.bioinfweb.jphyloio.formats.xml.elementreaders |
Contains general (abstract) implementations of
XMLElementReader used by
readers of XML formats. |
| info.bioinfweb.jphyloio.formats.xtg |
Contains classes for reading from and writing to streams/files in XTG format.
|
| info.bioinfweb.jphyloio.utils |
Contains general tool classes of JPhyloIO.
|
| Class and Description |
|---|
| LiteralMetadataContentEvent
This event represents a value of a literal metadata and is therefore always nested inside start and end events of the type
EventContentType.LITERAL_META. |
| LiteralMetadataEvent
Indicates that literal metadata is modeled at the current position of the document (event stream).
|
| ResourceMetadataEvent
Indicates that metadata linking a RDF resource has been encountered at the current position of the document.
|
| Class and Description |
|---|
| LiteralMetadataContentEvent
This event represents a value of a literal metadata and is therefore always nested inside start and end events of the type
EventContentType.LITERAL_META. |
| LiteralMetadataEvent
Indicates that literal metadata is modeled at the current position of the document (event stream).
|
| ResourceMetadataEvent
Indicates that metadata linking a RDF resource has been encountered at the current position of the document.
|
| Class and Description |
|---|
| LiteralContentSequenceType
Enumerates the types of sequences of
LiteralMetadataContentEvents that can be nested inside an
LiteralMetadataEvent. |
| URIOrStringIdentifier |
| Class and Description |
|---|
| LiteralContentSequenceType
Enumerates the types of sequences of
LiteralMetadataContentEvents that can be nested inside an
LiteralMetadataEvent. |
| Class and Description |
|---|
| LiteralMetadataContentEvent
This event represents a value of a literal metadata and is therefore always nested inside start and end events of the type
EventContentType.LITERAL_META. |
| LiteralMetadataEvent
Indicates that literal metadata is modeled at the current position of the document (event stream).
|
| Class and Description |
|---|
| LiteralContentSequenceType
Enumerates the types of sequences of
LiteralMetadataContentEvents that can be nested inside an
LiteralMetadataEvent. |
| URIOrStringIdentifier |
| Class and Description |
|---|
| LiteralMetadataContentEvent
This event represents a value of a literal metadata and is therefore always nested inside start and end events of the type
EventContentType.LITERAL_META. |
| LiteralMetadataEvent
Indicates that literal metadata is modeled at the current position of the document (event stream).
|
| ResourceMetadataEvent
Indicates that metadata linking a RDF resource has been encountered at the current position of the document.
|
| Class and Description |
|---|
| LiteralMetadataContentEvent
This event represents a value of a literal metadata and is therefore always nested inside start and end events of the type
EventContentType.LITERAL_META. |
| LiteralMetadataEvent
Indicates that literal metadata is modeled at the current position of the document (event stream).
|
| ResourceMetadataEvent
Indicates that metadata linking a RDF resource has been encountered at the current position of the document.
|
| URIOrStringIdentifier |
| Class and Description |
|---|
| LiteralMetadataContentEvent
This event represents a value of a literal metadata and is therefore always nested inside start and end events of the type
EventContentType.LITERAL_META. |
| Class and Description |
|---|
| URIOrStringIdentifier |
| Class and Description |
|---|
| URIOrStringIdentifier |
| Class and Description |
|---|
| URIOrStringIdentifier |